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L3_079_363G1_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_123_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(187..726)
DNA (540bp) protein (180aa)
Rubrerythrin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71755.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
rubrerythrin
L3_079_363G1_scaffold_123_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(841..1746)
DNA (906bp) protein (302aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
Base excision DNA repair protein, HhH-GPD family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W2_9ACTN
Base excision DNA repair protein, HhH-GPD family {ECO:0000313|EMBL:EBA39630.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_363G1_scaffold_123_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1768..2217)
DNA (450bp) protein (150aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Collinsella RepID=A4E9W3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71753.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
asnc family transcriptional regulator
L3_079_363G1_scaffold_123_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3085..3552)
DNA (468bp) protein (156aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphodiesterase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W4_9ACTN
phosphodiesterase, MJ0936 family
L3_079_363G1_scaffold_123_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3644..4348)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA39633.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LytTR family two component transcriptional regulator
L3_079_363G1_scaffold_123_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4433..5776)
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Collinsella RepID=A4E9W6_9ACTN
signal transduction histidine kinase LytS
L3_079_363G1_scaffold_123_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5773..6960)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71749.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_363G1_scaffold_123_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7144..8394)
DNA (1251bp) protein (417aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W8_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA39636.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_363G1_scaffold_123_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8496..9440)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39637.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_363G1_scaffold_123_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9532..10266)
DNA (735bp) protein (245aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAQ9_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA35925.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LytTR family two component transcriptional regulator
L3_079_363G1_scaffold_123_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10305..11696)
DNA (1392bp) protein (464aa)
signal transduction histidine kinase LytS (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH67_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA35924.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_363G1_scaffold_123_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11808..13085)
DNA (1278bp) protein (426aa)
Amidohydrolase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8A5_9ACTN
Amidohydrolase family protein {ECO:0000313|EMBL:CDA35923.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amidohydrolase
L3_079_363G1_scaffold_123_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13217..14668)
DNA (1452bp) protein (484aa)
Amino acid permease n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X3_9ACTN
Amino acid permease {ECO:0000313|EMBL:EBA39641.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid permease-associated protein
L3_079_363G1_scaffold_123_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15455..16063
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71742.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_363G1_scaffold_123_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16279..17241)
DNA (963bp) protein (321aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=2 Tax=Collinsella RepID=A4E9X5_9ACTN
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_363G1_scaffold_123_16
unknown

Not on your lists

17844..18260
DNA (417bp) protein (139aa)

This feature has no annotations

L3_079_363G1_scaffold_123_17
unknown

Not on your lists

18263..18787
DNA (525bp) protein (175aa)

This feature has no annotations

L3_079_363G1_scaffold_123_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19029..20390
DNA (1362bp) protein (454aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C5D8_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:KGI72586.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_363G1_scaffold_123_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20674..24213)
DNA (3540bp) protein (1180aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X8_9ACTN
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_079_363G1_scaffold_123_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24694..25632)
DNA (939bp) protein (313aa)
FHA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF30_9ACTN
FHA domain protein {ECO:0000313|EMBL:CDA35184.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_363G1_scaffold_123_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25636..27480)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39648.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
serine/threonine protein kinase
L3_079_363G1_scaffold_123_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27477..28382)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39649.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_363G1_scaffold_123_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28628..29224)
DNA (597bp) protein (199aa)
Recombination protein RecR n=2 Tax=Collinsella RepID=A4E9Y2_9ACTN
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DNA replication and repair protein RecR
L3_079_363G1_scaffold_123_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29238..29558)
DNA (321bp) protein (107aa)
Nucleoid-associated protein COLAER_01238 n=2 Tax=Collinsella RepID=A4E9Y3_9ACTN
Nucleoid-associated protein COLAER_01238 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_363G1_scaffold_123_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29898..30371
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4E9Y4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35190.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_363G1_scaffold_123_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30393..32840)
DNA (2448bp) protein (816aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLP6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71729.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_363G1_scaffold_123_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32956..33672
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1Y1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35192.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_363G1_scaffold_123_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33821..35674
DNA (1854bp) protein (618aa)
Kinase domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y7_9ACTN
Kinase domain protein {ECO:0000313|EMBL:EBA39655.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
serine/threonine protein kinase
L3_079_363G1_scaffold_123_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35671..36684
DNA (1014bp) protein (338aa)
FHA domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71726.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FHA domain-containing protein
L3_079_363G1_scaffold_123_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36691..37107
DNA (417bp) protein (139aa)
FHA domain protein n=2 Tax=Collinsella RepID=A4E9Y9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71725.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FHA domain-containing protein
Displaying items 1-30 of 68 in total

View Taxonomy