ggKbase home page

L3_079_363G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_196_1
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96..1649)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=root RepID=R6XCX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04162.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_079_363G1_scaffold_196_2

Not on your lists

1790..1990
DNA (201bp) protein (67aa)
Auxin efflux carrier n=1 Tax=human gut metagenome RepID=K1S352_9ZZZZ
Auxin efflux carrier {ECO:0000313|EMBL:EKC48090.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_079_363G1_scaffold_196_3

Not on your lists

1968..2786
DNA (819bp) protein (273aa)
Auxin efflux carrier n=1 Tax=human gut metagenome RepID=K1S352_9ZZZZ
Auxin efflux carrier {ECO:0000313|EMBL:EKC48090.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted permeases
L3_079_363G1_scaffold_196_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2892..3524
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W3X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04165.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_079_363G1_scaffold_196_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3541..4956
DNA (1416bp) protein (472aa)
Membrane bound O-acyl transferase MBOAT family protein n=2 Tax=root RepID=R6WJ63_9CLOT
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:CDD04166.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
membrane bound O-acyl transferase MBOAT family protein
L3_079_363G1_scaffold_196_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4977..6095
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XCX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04167.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_079_363G1_scaffold_196_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6107..6961
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium sp. CAG:91 RepID=R6WBF0_9CLOT
L3_079_363G1_scaffold_196_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7020..7964)
DNA (945bp) protein (315aa)
Transcriptional regulator AraC family n=2 Tax=root RepID=R6W3X5_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD04170.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
AraC family transcriptional regulator
L3_079_363G1_scaffold_196_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8225..9637
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WJ69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04171.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
glycoside hydrolase family protein
L3_079_363G1_scaffold_196_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10104..11522
DNA (1419bp) protein (473aa)
Maltose-binding protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XCX9_9CLOT
Maltose-binding protein {ECO:0000313|EMBL:CDD04172.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
extracellular solute-binding protein
L3_079_363G1_scaffold_196_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11661..12503
DNA (843bp) protein (281aa)
Putative starch degradation products transport system permease proteinamyD n=3 Tax=root RepID=R6VZG4_9CLOT
Putative starch degradation products transport system permease proteinamyD {ECO:0000313|EMBL:CDD04173.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
binding-protein-dependent transport system inner membrane protein
L3_079_363G1_scaffold_196_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12503..13342
DNA (840bp) protein (280aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WBF3_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDD04174.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
binding-protein-dependent transport system inner membrane protein
L3_079_363G1_scaffold_196_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13368..14861
DNA (1494bp) protein (498aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=root RepID=R6W3X9_9CLOT
L3_079_363G1_scaffold_196_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14891..15925
DNA (1035bp) protein (345aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator LacI family n=2 Tax=root RepID=R6WJ73_9CLOT
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDD04176.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_079_363G1_scaffold_196_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15929..16672
DNA (744bp) protein (248aa)
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XCY2_9CLOT
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:CDD04177.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_079_363G1_scaffold_196_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16689..17735)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04178.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Archaeal ATPase.
L3_079_363G1_scaffold_196_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

18186..23702
DNA (5517bp) protein (1839aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EPA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98989.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
fibronectin type III domain-containing protein
L3_079_363G1_scaffold_196_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23832..24875)
DNA (1044bp) protein (348aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.28)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WDQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02311.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_079_363G1_scaffold_196_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25012..25965
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VUB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02308.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_079_363G1_scaffold_196_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26134..27417
DNA (1284bp) protein (428aa)
Sodium/proton antiporter CPA1 family (TC 2.A.36) n=1 Tax=Clostridium sp. CAG:91 RepID=R6WDP7_9CLOT
Sodium/proton antiporter CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:CDD02301.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
L3_079_363G1_scaffold_196_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(27707..30163)
DNA (2457bp) protein (819aa)
cbp94A; cellobiose phosphorylase (EC:2.4.1.20)
Cellobiose phosphorylase Cbp94A n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQA0_9FIRM
Cellobiose phosphorylase Cbp94A {ECO:0000313|EMBL:CDA98986.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L3_079_363G1_scaffold_196_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30616..31656
DNA (1041bp) protein (347aa)
Transcriptional regulator LacI family n=1 Tax=Clostridium sp. CAG:91 RepID=R6X126_9CLOT
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDD00147.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
LacI family transcriptional regulator
L3_079_363G1_scaffold_196_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31669..33171
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W073_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00149.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_079_363G1_scaffold_196_24
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

33405..34319
DNA (915bp) protein (305aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=3 Tax=root RepID=R6EEL0_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDA98983.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_079_363G1_scaffold_196_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34332..35198
DNA (867bp) protein (289aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=3 Tax=root RepID=R6EQ94_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDD00151.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_079_363G1_scaffold_196_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35357..35512
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X129_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00152.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_079_363G1_scaffold_196_27
unknown

Not on your lists

35574..36077
DNA (504bp) protein (168aa)

This feature has no annotations

L3_079_363G1_scaffold_196_28

Not on your lists

comp(35930..36922)
DNA (993bp) protein (331aa)
pectinesterase (EC:3.1.1.11)
Pectin methylesterase (Fragment) n=1 Tax=human gut metagenome RepID=K1TRH5_9ZZZZ
Pectin methylesterase {ECO:0000313|EMBL:EKC61966.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_079_363G1_scaffold_196_29

Not on your lists

37103..38119
DNA (1017bp) protein (339aa)
ABC transporter, permease protein n=2 Tax=human gut metagenome RepID=K1TRT2_9ZZZZ
ABC transporter, permease protein {ECO:0000313|EMBL:EKC62046.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_079_363G1_scaffold_196_30
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38130..39032
DNA (903bp) protein (301aa)
ABC-type sugar transport system, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FR19_9CLOT
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EMS70903.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
Displaying items 1-30 of 55 in total

View Taxonomy