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L3_079_363G1_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_231_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

L3_079_363G1_scaffold_231_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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309..764
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B4Y3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77006.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted membrane protein
L3_079_363G1_scaffold_231_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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978..1172
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BWK8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47906.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_363G1_scaffold_231_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1338..2486
DNA (1149bp) protein (383aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47905.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted N6-adenine-specific DNA methylase
L3_079_363G1_scaffold_231_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2498..3106
DNA (609bp) protein (203aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=3 Tax=Lachnospiraceae RepID=A7B4X9_RUMGN
L3_079_363G1_scaffold_231_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3119..3598
DNA (480bp) protein (160aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Phosphodiesterase family protein n=3 Tax=Lachnospiraceae RepID=A7B4X8_RUMGN
phosphoesterase, MJ0936 family
L3_079_363G1_scaffold_231_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3828..4700
DNA (873bp) protein (291aa)
Transcription antiterminator LicT n=3 Tax=Lachnospiraceae RepID=A7B4X7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47902.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
bglG1; transcription antiterminator
L3_079_363G1_scaffold_231_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4684..6492
DNA (1809bp) protein (603aa)
bglP2; PTS system beta-glucoside-specific EIIBCA component BglP (EC:2.7.1.69 2.7.1.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BWK0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47901.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_363G1_scaffold_231_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6516..7628
DNA (1113bp) protein (371aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B4X5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47900.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_079_363G1_scaffold_231_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7683..7934
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B4X4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47899.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_363G1_scaffold_231_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7931..10174
DNA (2244bp) protein (748aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B4X3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47898.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Beta-glucuronidase
L3_079_363G1_scaffold_231_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10645..11436)
DNA (792bp) protein (264aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=4 Tax=Lachnospiraceae RepID=A7B4V1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47897.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Short-chain dehydrogenases of various substrate specificities
L3_079_363G1_scaffold_231_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11669..12844
DNA (1176bp) protein (392aa)
Rhodanese-like protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4V0_RUMGN
Rhodanese-like protein {ECO:0000313|EMBL:EDN76973.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L3_079_363G1_scaffold_231_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12951..13937
DNA (987bp) protein (329aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EDN76972.1}; EC=1.4.1.16 {ECO:0000313|EMBL:EDN76972.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4U9_RUMGN
L3_079_363G1_scaffold_231_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14067..14924
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4U8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76971.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_079_363G1_scaffold_231_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14905..15546
DNA (642bp) protein (214aa)
DnaJ domain protein n=3 Tax=Lachnospiraceae RepID=A7B4U7_RUMGN
DnaJ domain protein {ECO:0000313|EMBL:EDN76970.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_079_363G1_scaffold_231_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15537..16070
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4U6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76969.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_079_363G1_scaffold_231_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16176..17579
DNA (1404bp) protein (468aa)
Amino acid carrier protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4U5_RUMGN
Amino acid carrier protein {ECO:0000313|EMBL:EDN76968.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
amino acid carrier protein
L3_079_363G1_scaffold_231_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17806..19674
DNA (1869bp) protein (623aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Ruminococcus gnavus RepID=A7B4U4_RUMGN
L3_079_363G1_scaffold_231_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19821..20684
DNA (864bp) protein (288aa)
Transcriptional regulator, RpiR family n=3 Tax=Lachnospiraceae RepID=A7B4U2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47888.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, RpiR family
L3_079_363G1_scaffold_231_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20942..22822
DNA (1881bp) protein (627aa)
PTS system, beta-glucoside-specific, IIABC component n=3 Tax=Lachnospiraceae RepID=A7B4U1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47887.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
arbF; PTS system beta-glucoside-specific transporter subunit IIABC
L3_079_363G1_scaffold_231_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22847..24280
DNA (1434bp) protein (478aa)
bglA1; 6-phospho-beta-glucosidase BglA (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=3 Tax=Lachnospiraceae RepID=A7B4U0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19183.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_079_363G1_scaffold_231_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24332..24592)
DNA (261bp) protein (87aa)
Coat F domain protein n=4 Tax=Clostridiales RepID=A7B4T9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19182.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Coat F domain.
L3_079_363G1_scaffold_231_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24606..24788)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B4T8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19181.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_079_363G1_scaffold_231_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24992..26269
DNA (1278bp) protein (426aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=3 Tax=Lachnospiraceae RepID=A7B4T7_RUMGN
L3_079_363G1_scaffold_231_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26283..27248
DNA (966bp) protein (322aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=4 Tax=Clostridiales RepID=A7B4T6_RUMGN
L3_079_363G1_scaffold_231_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27268..28062
DNA (795bp) protein (265aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=3 Tax=Lachnospiraceae RepID=A7B4T5_RUMGN
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L3_079_363G1_scaffold_231_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28062..28964
DNA (903bp) protein (301aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
dihydroorotate dehydrogenase (subfamily 1) family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4T4_RUMGN
L3_079_363G1_scaffold_231_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29025..29909)
DNA (885bp) protein (295aa)
LysR substrate binding domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4T3_RUMGN
LysR substrate binding domain protein {ECO:0000313|EMBL:EDN76956.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LysR family transcriptional regulator
L3_079_363G1_scaffold_231_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29956..30603
DNA (648bp) protein (216aa)
AP endonuclease, family 2 n=3 Tax=Lachnospiraceae RepID=A7B4T2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47877.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sugar phosphate isomerase/epimerase
Displaying items 1-30 of 67 in total

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