ggKbase home page

L3_079_363G1_scaffold_279

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_279_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..659)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07228.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_363G1_scaffold_279_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(672..1040)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95124.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Relaxase/Mobilisation nuclease domain.
L3_079_363G1_scaffold_279_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1034..2257)
DNA (1224bp) protein (408aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJD7_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFQ06717.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Relaxase/Mobilisation nuclease domain.
L3_079_363G1_scaffold_279_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2229..2663)
DNA (435bp) protein (145aa)
Bacterial mobilization protein MobC n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH69_9FIRM
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EDP20475.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L3_079_363G1_scaffold_279_5
unknown

Not on your lists

comp(3658..3765)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_079_363G1_scaffold_279_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3841..5244)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06609.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_363G1_scaffold_279_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5246..6040)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06608.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_363G1_scaffold_279_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6052..7848)
DNA (1797bp) protein (599aa)
Heparinase II/III-like protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJR8_9FIRM
Heparinase II/III-like protein {ECO:0000313|EMBL:EFQ06607.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Heparinase II/III-like protein.
L3_079_363G1_scaffold_279_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7863..9125)
DNA (1263bp) protein (421aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJR7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ06606.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_079_363G1_scaffold_279_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9100..10917)
DNA (1818bp) protein (606aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJR6_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFQ06605.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
L3_079_363G1_scaffold_279_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11262..12581
DNA (1320bp) protein (440aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCV5_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL02668.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_079_363G1_scaffold_279_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12758..13684
DNA (927bp) protein (309aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJR2_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ06601.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_363G1_scaffold_279_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13702..14562
DNA (861bp) protein (287aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Faecalibacterium prausnitzii RepID=D4KCV7_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ06600.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_363G1_scaffold_279_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14636..16432
DNA (1797bp) protein (599aa)
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBL02671.1}; EC=3.2.1.31 {ECO:0000313|EMBL:CBL02671.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.31)
Beta-galactosidase/beta-glucuronidase n=2 Tax=Bacteria RepID=D4KCV8_9FIRM
L3_079_363G1_scaffold_279_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16438..17598
DNA (1161bp) protein (387aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDP22299.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDP22299.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Glycosyl hydrolase, family 88 n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S906_9FIRM
Glycosyl Hydrolase Family 88.
L3_079_363G1_scaffold_279_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17598..19286
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S907_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22300.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_079_363G1_scaffold_279_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19382..22396
DNA (3015bp) protein (1005aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K1V3_9FIRM
L3_079_363G1_scaffold_279_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22795..24423
DNA (1629bp) protein (543aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Faecalibacterium prausnitzii RepID=D4K1V4_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFQ06594.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_079_363G1_scaffold_279_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24601..27036)
DNA (2436bp) protein (812aa)
cellobiose phosphorylase (EC:2.4.1.20)
Glycosyltransferase family 36 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ10_9FIRM
Glycosyltransferase family 36 {ECO:0000313|EMBL:EFQ06852.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_363G1_scaffold_279_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27556..28563
DNA (1008bp) protein (336aa)
Sugar-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ07_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EFQ06849.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional regulator, LacI family
L3_079_363G1_scaffold_279_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28649..30088
DNA (1440bp) protein (480aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ06_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ06848.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_079_363G1_scaffold_279_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30192..31163
DNA (972bp) protein (324aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ05_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ06847.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_079_363G1_scaffold_279_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31166..32032
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ04_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ06846.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_079_363G1_scaffold_279_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32178..33467)
DNA (1290bp) protein (430aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ03_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EFQ06845.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_363G1_scaffold_279_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34104..34835
DNA (732bp) protein (244aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Transglycosylase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ01_9FIRM
Transglycosylase {ECO:0000313|EMBL:EFQ06843.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_363G1_scaffold_279_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35020..38295)
DNA (3276bp) protein (1092aa)
Efflux ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ00_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFQ06842.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_363G1_scaffold_279_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38289..38993)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIZ9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ06841.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_079_363G1_scaffold_279_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39167..39802)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06840.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_363G1_scaffold_279_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39974..41812)
DNA (1839bp) protein (613aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIZ7_9FIRM
L3_079_363G1_scaffold_279_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42617..44269
DNA (1653bp) protein (551aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIZ5_9FIRM
Displaying items 1-30 of 67 in total

View Taxonomy