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L3_079_363G1_scaffold_316

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_316_1
unknown

Not on your lists

275..499
DNA (225bp) protein (75aa)

This feature has no annotations

L3_079_363G1_scaffold_316_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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478..1410
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6H2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76505.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_079_363G1_scaffold_316_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1407..2684
DNA (1278bp) protein (426aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BTR2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18180.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Flp pilus assembly protein, ATPase CpaF
L3_079_363G1_scaffold_316_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2707..3324
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49554.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Flp pilus assembly protein TadB
L3_079_363G1_scaffold_316_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3334..4557
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6G9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76502.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_079_363G1_scaffold_316_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4578..4781
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BTN6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18177.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_079_363G1_scaffold_316_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4783..6150
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67029.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_079_363G1_scaffold_316_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6243..7040
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6G6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76499.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_079_363G1_scaffold_316_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7028..7459
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67031.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Type IV leader peptidase family.
L3_079_363G1_scaffold_316_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7460..7855
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6G4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49479.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_363G1_scaffold_316_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7868..8662
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67033.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_079_363G1_scaffold_316_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8714..9316
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BUK2_RUMGN
Putative rhomboid protease GluP {ECO:0000313|EMBL:EDN76495.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L3_079_363G1_scaffold_316_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9300..10031)
DNA (732bp) protein (244aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6G1_RUMGN
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_079_363G1_scaffold_316_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10211..10618
DNA (408bp) protein (136aa)
HIT family protein n=3 Tax=Lachnospiraceae RepID=A7B6F9_RUMGN
HIT family protein {ECO:0000313|EMBL:EDN76492.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L3_079_363G1_scaffold_316_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10633..11175
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6F8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18168.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_363G1_scaffold_316_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11230..12294)
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=4 Tax=Clostridiales RepID=A7B6F7_RUMGN
L3_079_363G1_scaffold_316_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12440..13216
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67039.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_079_363G1_scaffold_316_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13278..13778
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TN20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67040.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_079_363G1_scaffold_316_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13971..14213)
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U7C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49469.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_079_363G1_scaffold_316_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14590..15366
DNA (777bp) protein (259aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6F2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18163.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_079_363G1_scaffold_316_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15429..16778
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=3 Tax=Lachnospiraceae RepID=A7B6F1_RUMGN
L3_079_363G1_scaffold_316_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16856..17764)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6F0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76483.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
AraC-type DNA-binding domain-containing proteins
L3_079_363G1_scaffold_316_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17933..19297
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6E9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76482.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_079_363G1_scaffold_316_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19325..20194
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSS6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18159.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hydrolase
L3_079_363G1_scaffold_316_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20210..21034
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSJ3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49463.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized protein, putative amidase
L3_079_363G1_scaffold_316_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21126..21719
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6E6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76479.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
FOG: FHA domain
L3_079_363G1_scaffold_316_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21808..24075
DNA (2268bp) protein (756aa)
Aconitase A (EC:4.2.1.3)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6E5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18156.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_079_363G1_scaffold_316_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24229..24753
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BTN9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49460.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_363G1_scaffold_316_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24756..26708
DNA (1953bp) protein (651aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JU58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49459.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
L3_079_363G1_scaffold_316_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27097..27576
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSI7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49458.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein (putative transposase or invertase)
Displaying items 1-30 of 54 in total

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