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L3_079_363G1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_357_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88..453)
DNA (366bp) protein (122aa)
HNH endonuclease n=2 Tax=Eubacterium siraeum RepID=D4JVJ7_9FIRM
HNH endonuclease.
HNH endonuclease {ECO:0000313|EMBL:CBK97116.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_079_363G1_scaffold_357_2
unknown

Not on your lists

comp(474..704)
DNA (231bp) protein (77aa)

This feature has no annotations

L3_079_363G1_scaffold_357_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(741..1040)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56159.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_363G1_scaffold_357_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1033..1272)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF56158.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1269..1496)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56157.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1493..2056)
DNA (564bp) protein (188aa)
Crossover junction endodeoxyribonuclease RusA n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LG28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56156.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
endodeoxyribonuclease RusA
L3_079_363G1_scaffold_357_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2352..4580)
DNA (2229bp) protein (743aa)
Primase 2 n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I137_CLOCE
Uncharacterized protein {ECO:0000313|EMBL:KGF56155.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
primase
L3_079_363G1_scaffold_357_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4582..6177)
DNA (1596bp) protein (532aa)
Helicase C-terminal domain protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L0I0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56154.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
DNA or RNA helicases of superfamily II
L3_079_363G1_scaffold_357_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6177..6698)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5H4V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56153.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phage protein
L3_079_363G1_scaffold_357_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6771..7847)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LG24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56152.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_363G1_scaffold_357_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7848..8138)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Paenibacillus larvae RepID=UPI0001F7A88A
Uncharacterized protein {ECO:0000313|EMBL:KGF56151.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_363G1_scaffold_357_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8259..9131)
DNA (873bp) protein (291aa)
SMC domain protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SXE0_SYNGF
Uncharacterized protein {ECO:0000313|EMBL:KGF56151.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
SMC domain-containing protein
L3_079_363G1_scaffold_357_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9128..9412)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56150.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9409..9945)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C931_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56149.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10081..10203)
DNA (123bp) protein (41aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF56148.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10196..10483)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF56147.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10487..11317)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Kurthia sp. JC8E RepID=UPI0002887B9F
Uncharacterized protein {ECO:0000313|EMBL:KGF56146.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phage regulatory protein, Rha family
L3_079_363G1_scaffold_357_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11344..11559)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56145.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein predicted by Glimmer/Critica
L3_079_363G1_scaffold_357_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12076..13107
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00037EFC9E
Uncharacterized protein {ECO:0000313|EMBL:KGF56144.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_363G1_scaffold_357_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13137..13706
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56143.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_363G1_scaffold_357_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14120..15226
DNA (1107bp) protein (369aa)
Site-specific recombinase, phage integrase family n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LK61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56142.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Phage integrase family.
L3_079_363G1_scaffold_357_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15917..16438)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CAH8_9CLOT
hypothetical protein
L3_079_363G1_scaffold_357_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16481..16954)
DNA (474bp) protein (158aa)
SsrA-binding protein n=2 Tax=Clostridiales RepID=H1C6X6_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
SsrA-binding protein
L3_079_363G1_scaffold_357_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17024..17518)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C900_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56139.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17696..18232
DNA (537bp) protein (179aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
Hydrolase, NUDIX family n=2 Tax=Clostridiales RepID=G9YWS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35742.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_363G1_scaffold_357_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18251..18961
DNA (711bp) protein (237aa)
Transcriptional regulatory protein WalR n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARN3_9CLOT
Transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERI62058.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator
L3_079_363G1_scaffold_357_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19168..20955
DNA (1788bp) protein (596aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
two-component histidine kinase (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6X2_9FIRM
L3_079_363G1_scaffold_357_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20942..22306
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56135.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_363G1_scaffold_357_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22319..23155
DNA (837bp) protein (279aa)
YycH protein n=2 Tax=Clostridiales RepID=G9YWS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35738.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_363G1_scaffold_357_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23459..23719
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YWS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35737.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy