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L3_079_363G1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_397_1
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52..576
DNA (525bp) protein (175aa)
Chromate transport protein n=7 Tax=Bacteroides RepID=A7UZ59_BACUN
Chromate transporter {ECO:0000313|EMBL:EFV26710.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Chromate transport protein ChrA
L3_079_363G1_scaffold_397_2
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(568..1785)
DNA (1218bp) protein (406aa)
L-fucose:H+ symporter permease n=1 Tax=Bacteroides sp. D20 RepID=D2F1W5_9BACE
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EFA18926.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L-fucose transporter
L3_079_363G1_scaffold_397_3
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1939..2823
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=4 Tax=Bacteroides RepID=D2F1W6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE00975.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
transcriptional regulator
L3_079_363G1_scaffold_397_4
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2917..3336
DNA (420bp) protein (140aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Bacteroides sp. D20 RepID=D2F1W7_9BACE
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EFA18928.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_079_363G1_scaffold_397_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3313..4482)
DNA (1170bp) protein (390aa)
C-S lyase family protein {ECO:0000313|EMBL:KDS50938.1}; EC=4.4.-.- {ECO:0000313|EMBL:KDS50938.1};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Aminotransferase, class I/II n=2 Tax=Bacteroides RepID=A7UZ64_BACUN
putative aminotransferase
L3_079_363G1_scaffold_397_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4479..5345)
DNA (867bp) protein (289aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9IG78_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY79518.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_079_363G1_scaffold_397_7
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5362..5925)
DNA (564bp) protein (188aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Bacteroides sp. D20 RepID=D2F1X0_9BACE
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFA18931.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
acetyltransferase
L3_079_363G1_scaffold_397_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5934..6749)
DNA (816bp) protein (272aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Bacteroides sp. D20 RepID=D2F1X1_9BACE
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EFA18932.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Carboxymuconolactone decarboxylase
L3_079_363G1_scaffold_397_9
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6761..7756)
DNA (996bp) protein (332aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Bacteroides sp. D20 RepID=D2F1X2_9BACE
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EFA18933.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
NADPH-flavin oxidoreductase
L3_079_363G1_scaffold_397_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8271..9587
DNA (1317bp) protein (439aa)
Aminotransferase class I and II n=4 Tax=Bacteroides RepID=E5V8U5_9BACE
Aminotransferase class I and II family protein {ECO:0000313|EMBL:KDS50931.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Aspartate/tyrosine/aromatic aminotransferase
L3_079_363G1_scaffold_397_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9616..11196)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9IG52_BACUN
Susd and RagB outer membrane lipofamily protein {ECO:0000313|EMBL:KDS50930.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_079_363G1_scaffold_397_12
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11217..14324)
DNA (3108bp) protein (1036aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides sp. D20 RepID=D2EU55_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFA21482.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Outer membrane receptor proteins, mostly Fe transport
L3_079_363G1_scaffold_397_13
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14464..15057
DNA (594bp) protein (198aa)
Putative ACR, COG1678 n=3 Tax=Bacteroides RepID=A7UXT4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26696.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative transcriptional regulator
L3_079_363G1_scaffold_397_14
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15050..15586)
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=1 Tax=Bacteroides sp. D20 RepID=D2EU53_9BACE
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFA21480.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
GCN5-related N-acetyltransferase
L3_079_363G1_scaffold_397_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15600..16058)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7UXT6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26694.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_079_363G1_scaffold_397_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16108..16725)
DNA (618bp) protein (206aa)
Recombination protein RecR n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I0C5_BACUN
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
DNA replication and repair protein RecR
L3_079_363G1_scaffold_397_17
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16901..17509
DNA (609bp) protein (203aa)
Probable GTP-binding protein EngB n=1 Tax=Bacteroides sp. D20 RepID=D2EU50_9BACE
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ribosome biogenesis GTP-binding protein YsxC
L3_079_363G1_scaffold_397_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17521..18117
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I0U0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS09646.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_079_363G1_scaffold_397_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18912..20057)
DNA (1146bp) protein (382aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=2 Tax=Bacteroides uniformis RepID=I9IYN4_BACUN
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:KDS50849.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L3_079_363G1_scaffold_397_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20199..22553)
DNA (2355bp) protein (785aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
UvrD/REP helicase n=1 Tax=Bacteroides sp. D20 RepID=D2EU47_9BACE
putative helicase
L3_079_363G1_scaffold_397_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22698..23318
DNA (621bp) protein (207aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Manganese/iron superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=6 Tax=Bacteroides RepID=A7V429_BACUN
L3_079_363G1_scaffold_397_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23487..24095
DNA (609bp) protein (203aa)
Thiamine monophosphate synthase/TENI n=5 Tax=Bacteroides RepID=D2EU45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79062.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
thiamine monophosphate synthase
L3_079_363G1_scaffold_397_23
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24109..24990)
DNA (882bp) protein (294aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Hsp90-like protein n=4 Tax=Bacteroides RepID=E5V8T2_9BACE
histidine kinase
L3_079_363G1_scaffold_397_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25472..25855)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UZI1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO55676.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_079_363G1_scaffold_397_25

Not on your lists

comp(26707..28716)
DNA (2010bp) protein (670aa)
Kojibiose phosphorylase n=1 Tax=gut metagenome RepID=J9GWH7_9ZZZZ
Kojibiose phosphorylase {ECO:0000313|EMBL:EJX07363.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
Trehalose and maltose hydrolases (possible phosphorylases)
L3_079_363G1_scaffold_397_26
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28781..31066)
DNA (2286bp) protein (762aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6RTV8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC51085.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
L3_079_363G1_scaffold_397_27
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31090..33036)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6UPK2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC51086.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
alpha-glucosidase
L3_079_363G1_scaffold_397_28
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33049..34044)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6SWW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC51087.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
Glycosyl hydrolases family 43.
L3_079_363G1_scaffold_397_29
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34056..35708)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6RQC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC51088.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
SusD family.
L3_079_363G1_scaffold_397_30
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35730..39095)
DNA (3366bp) protein (1122aa)
TonB-linked outer membrane protein n=1 Tax=Bacteroides faecis RepID=UPI000262D77A
Uncharacterized protein {ECO:0000313|EMBL:CDC87717.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
Outer membrane receptor proteins, mostly Fe transport
Displaying items 1-30 of 39 in total

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