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L3_079_363G1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_406_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(653..1399)
DNA (747bp) protein (249aa)
Anti-sigma factor antagonist n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7V2_9ACTN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sulfate transporter/antisigma-factor antagonist STAS
L3_079_363G1_scaffold_406_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1478..3823)
DNA (2346bp) protein (782aa)
Stage II sporulation protein E n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7V3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72516.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
protein serine phosphatase with GAF(s) sensor(s)
L3_079_363G1_scaffold_406_3
unknown

Not on your lists

comp(4038..4229)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_079_363G1_scaffold_406_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4572..5600)
DNA (1029bp) protein (343aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNM3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35971.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptide ABC transporter ATPase
L3_079_363G1_scaffold_406_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5600..6691)
DNA (1092bp) protein (364aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAX0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72518.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptide ABC transporter ATPase
L3_079_363G1_scaffold_406_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6694..7629)
DNA (936bp) protein (312aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHC6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72519.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L3_079_363G1_scaffold_406_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7644..8681)
DNA (1038bp) protein (346aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8E8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72520.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L3_079_363G1_scaffold_406_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8838..10514)
DNA (1677bp) protein (559aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4B4_9ACTN
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDA35967.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
family 5 extracellular solute-binding protein
L3_079_363G1_scaffold_406_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10809..11063)
DNA (255bp) protein (85aa)
Preprotein translocase, SecG subunit n=2 Tax=Collinsella RepID=A4ECN0_9ACTN
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDA35966.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
preprotein translocase subunit SecG
L3_079_363G1_scaffold_406_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11222..12775)
DNA (1554bp) protein (518aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAW4_9ACTN
L3_079_363G1_scaffold_406_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12781..13548)
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHC0_9ACTN
L3_079_363G1_scaffold_406_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13541..14731)
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECN4_9ACTN
L3_079_363G1_scaffold_406_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14872..15897)
DNA (1026bp) protein (342aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECN5_9ACTN
L3_079_363G1_scaffold_406_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16091..17020)
DNA (930bp) protein (310aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNL1_9ACTN
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_363G1_scaffold_406_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17027..17947)
DNA (921bp) protein (307aa)
UPF0042 nucleotide-binding protein BN511_01214 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAV9_9ACTN
Nucleotide-binding protein HMPREF9463_01954 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_363G1_scaffold_406_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18049..18735)
DNA (687bp) protein (229aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHB2_9ACTN
L3_079_363G1_scaffold_406_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18876..19841)
DNA (966bp) protein (322aa)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8D9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72530.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator/sugar kinase
L3_079_363G1_scaffold_406_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20015..21019)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4A3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35957.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
dihydrodipicolinate synthetase
L3_079_363G1_scaffold_406_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21004..21855)
DNA (852bp) protein (284aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNK5_9ACTN
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:CDA35956.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Acetyl xylan esterase
L3_079_363G1_scaffold_406_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21848..22732)
DNA (885bp) protein (295aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECP2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72533.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Acetyl xylan esterase
L3_079_363G1_scaffold_406_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22906..23733)
DNA (828bp) protein (276aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4ECP3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35954.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter-like protein
L3_079_363G1_scaffold_406_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23734..25749)
DNA (2016bp) protein (672aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8D5_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35953.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_079_363G1_scaffold_406_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25753..26709)
DNA (957bp) protein (319aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A496_9ACTN
ABC transporter permease protein {ECO:0000313|EMBL:CDA35952.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
binding-protein-dependent transport system inner membrane protein
L3_079_363G1_scaffold_406_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26865..28478)
DNA (1614bp) protein (538aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNK0_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA35951.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
family 5 extracellular solute-binding protein
L3_079_363G1_scaffold_406_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28843..30783)
DNA (1941bp) protein (647aa)
UvrABC system protein C n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAT7_9ACTN
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
excinuclease ABC subunit C
L3_079_363G1_scaffold_406_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30790..32472)
DNA (1683bp) protein (561aa)
Integral membrane protein MviN n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH99_9ACTN
Integral membrane protein MviN {ECO:0000313|EMBL:CDA35949.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
virulence factor MVIN family protein
L3_079_363G1_scaffold_406_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32476..32976)
DNA (501bp) protein (167aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Collinsella RepID=A4ECP9_9ACTN
ybaK/ebsC protein
L3_079_363G1_scaffold_406_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33109..35988)
DNA (2880bp) protein (960aa)
UvrABC system protein A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ0_9ACTN
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
excinuclease ABC subunit A
L3_079_363G1_scaffold_406_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36182..38335
DNA (2154bp) protein (718aa)
Arylsulfatase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72542.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sulfatase
L3_079_363G1_scaffold_406_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38481..39311
DNA (831bp) protein (277aa)
Nucleotide-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ4_9ACTN
Nucleotide-binding protein {ECO:0000313|EMBL:EBA38664.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ParA/MinD-like ATPase
Displaying items 1-30 of 35 in total

View Taxonomy