ggKbase home page

L3_079_363G1_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_429_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(92..958)
DNA (867bp) protein (289aa)
ABC-type proline/glycine betaine transport systems, periplasmic components n=6 Tax=Bacteroides RepID=D6CWK5_9BACE
ABC-type proline/glycine betaine transport systems, periplasmic components
Uncharacterized protein {ECO:0000313|EMBL:EIY84289.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_079_363G1_scaffold_429_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(979..1803)
DNA (825bp) protein (275aa)
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CWK6_9BACE
ABC-type proline/glycine betaine transport system, permease component
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:CBK66558.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_079_363G1_scaffold_429_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1800..3026)
DNA (1227bp) protein (409aa)
glycine betaine/L-proline transport ATP binding subunit (EC:3.6.3.32)
Glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:CBK66559.1}; EC=3.6.3.32 {ECO:0000313|EMBL:CBK66559.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Glycine betaine/L-proline transport ATP binding subunit n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CWK7_9BACE
L3_079_363G1_scaffold_429_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3325..3663)
DNA (339bp) protein (113aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EDO10113.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EDO10113.1};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M306_BACOV
O(6)-alkylguanine repair protein YbaZ
L3_079_363G1_scaffold_429_5
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3747..5135
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7J1C0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14780.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_079_363G1_scaffold_429_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5216..8053)
DNA (2838bp) protein (946aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M308_BACOV
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDO10115.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_079_363G1_scaffold_429_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8478..9365)
DNA (888bp) protein (296aa)
Fructokinase {ECO:0000313|EMBL:CDM03375.1}; EC=2.7.1.4 {ECO:0000313|EMBL:CDM03375.1};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=4 Tax=Bacteroides RepID=C3QJ59_9BACE
L3_079_363G1_scaffold_429_8
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9401..10567)
DNA (1167bp) protein (389aa)
Transporter, major facilitator family protein n=6 Tax=Bacteroides RepID=A7M311_BACOV
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEZ01886.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Fucose permease
L3_079_363G1_scaffold_429_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10911..12758)
DNA (1848bp) protein (616aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.65)
Beta-fructosidases (Levanase/invertase) n=2 Tax=Bacteroides RepID=D6CWL4_9BACE
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EDO10120.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_079_363G1_scaffold_429_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12884..14806)
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M314_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10121.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_079_363G1_scaffold_429_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14874..16001)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M315_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10122.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_079_363G1_scaffold_429_12
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16027..17784)
DNA (1758bp) protein (586aa)
SusD family n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CWL7_9BACE
SusD family.
SusD family {ECO:0000313|EMBL:CBK66569.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_079_363G1_scaffold_429_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17809..20880)
DNA (3072bp) protein (1024aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M317_BACOV
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDO10124.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Outer membrane cobalamin receptor protein
L3_079_363G1_scaffold_429_14
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21170..22042
DNA (873bp) protein (291aa)
Aldose 1-epimerase subfamily n=1 Tax=Bacteroides sp. D22 RepID=D7J1B0_9BACE
Aldose 1-epimerase subfamily {ECO:0000313|EMBL:EFI14770.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Galactose mutarotase and related enzymes
L3_079_363G1_scaffold_429_15
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22214..24076)
DNA (1863bp) protein (621aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.65)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M9P3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97406.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_079_363G1_scaffold_429_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24320..25342
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M320_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10127.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_079_363G1_scaffold_429_17
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25430..26275)
DNA (846bp) protein (282aa)
Serine protease n=1 Tax=Bacteroides sp. D22 RepID=D7J1A6_9BACE
Serine protease {ECO:0000313|EMBL:EFI14766.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_079_363G1_scaffold_429_18
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26256..28478)
DNA (2223bp) protein (741aa)
Sodium/hydrogen antiporter n=1 Tax=Bacteroides sp. D22 RepID=D7J1A5_9BACE
Sodium/hydrogen antiporter {ECO:0000313|EMBL:EFI14765.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
transporter, CPA2 family (2.A.37)
L3_079_363G1_scaffold_429_19
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28663..29190
DNA (528bp) protein (176aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QJ72_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGM97401.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_079_363G1_scaffold_429_20
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29154..29468)
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UKH6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX26259.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_079_363G1_scaffold_429_21
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29455..29808)
DNA (354bp) protein (118aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=D0TXI1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ01873.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hypothetical protein
L3_079_363G1_scaffold_429_22
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29813..30997
DNA (1185bp) protein (395aa)
Cysteine peptidase n=1 Tax=Bacteroides sp. D22 RepID=D7J1A1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97399.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Aminopeptidase C
L3_079_363G1_scaffold_429_23
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31705..32556)
DNA (852bp) protein (284aa)
Transcription regulator, AraC-type n=1 Tax=Bacteroides sp. D22 RepID=D7J199_9BACE
Transcription regulator, AraC-type {ECO:0000313|EMBL:EFI14759.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
transcriptional regulator, AraC family
L3_079_363G1_scaffold_429_24
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32796..34154
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7J198_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14758.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_079_363G1_scaffold_429_25
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34186..37032
DNA (2847bp) protein (949aa)
Vitamin B12 receptor n=1 Tax=Bacteroides sp. D22 RepID=D7J197_9BACE
Vitamin B12 receptor {ECO:0000313|EMBL:EFI14757.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Outer membrane cobalamin receptor protein
L3_079_363G1_scaffold_429_26
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37168..37848
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7J196_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14756.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_079_363G1_scaffold_429_27
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37889..38920
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UNJ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97394.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Alpha-L-fucosidase
L3_079_363G1_scaffold_429_28
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38951..39763
DNA (813bp) protein (271aa)
Alpha-L-fucosidase 1 n=1 Tax=Bacteroides sp. D22 RepID=D7J195_9BACE
Alpha-L-fucosidase 1 {ECO:0000313|EMBL:EFI14755.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
putative lipoprotein
L3_079_363G1_scaffold_429_29
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39867..40181
DNA (315bp) protein (105aa)
DNA polymerase sigma n=2 Tax=Bacteroides RepID=D6CWN5_9BACE
DNA polymerase sigma
Toxin-antitoxin system toxin component {ECO:0000313|EMBL:EFI14754.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_079_363G1_scaffold_429_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40178..40582
DNA (405bp) protein (135aa)
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN n=2 Tax=Bacteroides RepID=D6CWN6_9BACE
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN {ECO:0000313|EMBL:CBK66588.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Displaying items 1-30 of 49 in total

View Taxonomy