ggKbase home page

L3_079_363G1_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_434_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..447
DNA (447bp) protein (149aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E1WTU8_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ95136.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_079_363G1_scaffold_434_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1110..2432
DNA (1323bp) protein (441aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=E1WTU9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ83821.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L3_079_363G1_scaffold_434_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2469..4052
DNA (1584bp) protein (528aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I3HUZ7_BACFG
hypothetical protein
Outer membrane transport family protein {ECO:0000313|EMBL:EXZ83822.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L3_079_363G1_scaffold_434_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4454..5572
DNA (1119bp) protein (373aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q64VU4_BACFR
putative perforin protein
Uncharacterized protein {ECO:0000313|EMBL:BAD48382.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_363G1_scaffold_434_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5650..6099)
DNA (450bp) protein (150aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I3HUZ5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY97813.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
cytidine/deoxycytidylate deaminase
L3_079_363G1_scaffold_434_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6285..7178)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8WYP0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY49301.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_079_363G1_scaffold_434_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7192..7641)
DNA (450bp) protein (150aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=Q64VU1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE53358.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_363G1_scaffold_434_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7670..8095)
DNA (426bp) protein (142aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q64VU0_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ45120.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_079_363G1_scaffold_434_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8092..8613)
DNA (522bp) protein (174aa)
Sigma-70 family RNA polymerase sigma factor n=12 Tax=Bacteroides RepID=C6I3K5_9BACE
putative RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EXZ78989.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_363G1_scaffold_434_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8767..9753)
DNA (987bp) protein (329aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I3K3_9BACE
putative GFO/IDH/MocA-family oxidoreductase
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EYE46058.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_363G1_scaffold_434_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9992..10816)
DNA (825bp) protein (275aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6I3K2_9BACE
putative solute-binding protein precursor
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:EXZ73832.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L3_079_363G1_scaffold_434_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10825..12867)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64VT4_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD48392.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_363G1_scaffold_434_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12990..13532)
DNA (543bp) protein (181aa)
Ketoisovalerate oxidoreductase subunit VorA n=14 Tax=Bacteroides RepID=Q64VT3_BACFR
putative 2-oxoglutarate synthase subunit
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein {ECO:0000313|EMBL:EXZ78993.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_363G1_scaffold_434_14
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13551..14312)
DNA (762bp) protein (254aa)
Ketoisovalerate oxidoreductase subunit VorA n=13 Tax=Bacteroides RepID=Q64VT2_BACFR
putative 2-oxoglutarate synthase subunit
Ketoisovalerate oxidoreductase subunit VorA {ECO:0000313|EMBL:CDD38130.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_363G1_scaffold_434_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14409..14582)
DNA (174bp) protein (58aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=E1WTW2_BACF6
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EYE53366.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_363G1_scaffold_434_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14593..15675)
DNA (1083bp) protein (361aa)
Ketoisovalerate oxidoreductase subunit VorB n=12 Tax=Bacteroides RepID=Q64VT0_BACFR
putative 2-oxoglutarate oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EIY49311.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_079_363G1_scaffold_434_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15687..15914)
DNA (228bp) protein (76aa)
Uncharacterized protein n=18 Tax=Bacteroides RepID=Q64VS9_BACFR
putative ferredoxin
4Fe-4S binding domain protein {ECO:0000313|EMBL:EXZ95150.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_079_363G1_scaffold_434_18
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15933..16208)
DNA (276bp) protein (92aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WTW5_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD38126.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_363G1_scaffold_434_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16518..16952)
DNA (435bp) protein (145aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EYE53371.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EYE53371.1};; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Ribose 5-phosphate isomerase B n=13 Tax=Bacteroides RepID=Q64VS7_BACFR
rpiB; putative ribose 5-phosphate isomerase
L3_079_363G1_scaffold_434_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17035..19044)
DNA (2010bp) protein (670aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
tktB; putative transketolase (EC:2.2.1.1)
Transketolase n=8 Tax=Bacteroides RepID=E1WTW7_BACF6
L3_079_363G1_scaffold_434_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19199..20353)
DNA (1155bp) protein (385aa)
galK; putative galactokinase (EC:2.7.1.6)
Galactokinase n=10 Tax=Bacteroides RepID=Q64VS5_BACFR
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
L3_079_363G1_scaffold_434_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20389..21714)
DNA (1326bp) protein (442aa)
Glucose/galactose transporter n=10 Tax=Bacteroides RepID=Q64VS4_BACFR
putative transmembrane glucose/galactose transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EXZ29228.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_079_363G1_scaffold_434_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21765..22862)
DNA (1098bp) protein (366aa)
putative aldose 1-epimerase precursor (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Aldose 1-epimerase n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LET7_BACFN
L3_079_363G1_scaffold_434_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23126..24097
DNA (972bp) protein (324aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EYA39530.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EYA39530.1};; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
Mannose-6-phosphate isomerase n=13 Tax=Bacteroides RepID=Q64VS2_BACFR
putative mannose-6-phosphate isomerase
L3_079_363G1_scaffold_434_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24163..24426)
DNA (264bp) protein (88aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E1WTX2_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE53377.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_363G1_scaffold_434_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24431..24796)
DNA (366bp) protein (122aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=Q64VS0_BACFR
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EKA84352.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_363G1_scaffold_434_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24823..25032)
DNA (210bp) protein (70aa)
Uncharacterized protein n=18 Tax=Bacteroides RepID=E1WTX4_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR52305.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
L3_079_363G1_scaffold_434_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25330..26613)
DNA (1284bp) protein (428aa)
ATP-dependent RNA helicase DeaD n=12 Tax=Bacteroides RepID=Q64VR8_BACFR
putative ATP-dependent RNA helicase
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:EXZ45141.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_079_363G1_scaffold_434_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26804..27574
DNA (771bp) protein (257aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6I3I4_9BACE
putative short-chain dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EIY97837.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_363G1_scaffold_434_30
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27689..28186
DNA (498bp) protein (166aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WTX7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD38114.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Displaying items 1-30 of 92 in total

View Taxonomy