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L3_079_363G1_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_542_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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107..1174
DNA (1068bp) protein (356aa)
Cell well associated RhsD protein (Fragment) n=2 Tax=human gut metagenome RepID=K1UGB8_9ZZZZ
RHS repeat-associated core domain protein {ECO:0000313|EMBL:KDS48093.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
RHS repeat-associated core domain
L3_079_363G1_scaffold_542_2

Not on your lists

1187..1594
DNA (408bp) protein (136aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U7C8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC81162.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_079_363G1_scaffold_542_3
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1937..2887
DNA (951bp) protein (317aa)
RHS repeat-associated core domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX73_9BACE
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EFA20259.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RHS repeat-associated core domain
L3_079_363G1_scaffold_542_4
unknown

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comp(2816..3058)
DNA (243bp) protein (81aa)

This feature has no annotations

L3_079_363G1_scaffold_542_5

Not on your lists

3354..3467
DNA (114bp) protein (38aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RJR9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC43889.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_079_363G1_scaffold_542_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3481..3756
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS48090.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
RHS repeat-associated core domain
L3_079_363G1_scaffold_542_7
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3760..4032
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX75_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20261.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L3_079_363G1_scaffold_542_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4360..4779)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20262.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
yjgA; hypothetical protein
L3_079_363G1_scaffold_542_9

Not on your lists

4934..5095
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=root RepID=D2EX77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKC63719.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_079_363G1_scaffold_542_10
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5166..5756
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V6S7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV27443.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_079_363G1_scaffold_542_11
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5753..6484
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX79_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20265.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_079_363G1_scaffold_542_12
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6489..7241
DNA (753bp) protein (251aa)
Uroporphyrinogen-III synthase n=6 Tax=root RepID=D2EX80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE03319.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
uroporphyrinogen-III synthase
L3_079_363G1_scaffold_542_13
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7377..7793
DNA (417bp) protein (139aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Ribonuclease P protein component n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EPA6_9BACE
ribonuclease P protein component
L3_079_363G1_scaffold_542_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7790..8011
DNA (222bp) protein (74aa)
Putative membrane protein insertion efficiency factor n=6 Tax=Bacteroides RepID=A7V9D4_BACUN
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_079_363G1_scaffold_542_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8008..8673
DNA (666bp) protein (222aa)
Hydrolase, TatD family n=1 Tax=Bacteroides sp. D20 RepID=D2EX83_9BACE
Hydrolase, TatD family {ECO:0000313|EMBL:EFA20269.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
TatD-related deoxyribonuclease
L3_079_363G1_scaffold_542_16
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8781..10073
DNA (1293bp) protein (431aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=4 Tax=root RepID=I9U109_BACUN
L3_079_363G1_scaffold_542_17
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10522..10674
DNA (153bp) protein (51aa)
putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1 family protein n=4 Tax=Bacteroides RepID=A7V9D1_BACUN
5-keto-4-deoxyuronate isomerase {ECO:0000313|EMBL:CDE03308.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_079_363G1_scaffold_542_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10713..11516
DNA (804bp) protein (268aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.69)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=6 Tax=Bacteroides RepID=A7V9D0_BACUN
Short chain dehydrogenase {ECO:0000313|EMBL:EFV27423.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_079_363G1_scaffold_542_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11682..12914
DNA (1233bp) protein (411aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2EX87_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY75500.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_079_363G1_scaffold_542_20
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12993..13625)
DNA (633bp) protein (211aa)
Response regulator receiver domain protein n=4 Tax=Bacteroides RepID=A7V9C7_BACUN
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EFV27426.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
LuxR family transcriptional regulator
L3_079_363G1_scaffold_542_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13622..15511)
DNA (1890bp) protein (630aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides RepID=A7V9C6_BACUN
Hsp90-like protein {ECO:0000313|EMBL:EFV27427.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
signal transduction histidine kinase
L3_079_363G1_scaffold_542_22
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15833..16729
DNA (897bp) protein (299aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V9C3_BACUN
YD repeat (Two copies) {ECO:0000313|EMBL:CDE03301.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
putative lipoprotein
L3_079_363G1_scaffold_542_23
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16873..17529)
DNA (657bp) protein (219aa)
Polysaccharide deacetylase n=8 Tax=root RepID=A7V9C1_BACUN
Polysaccharide deacetylase {ECO:0000313|EMBL:EFA20277.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
polysaccharide deacetylase
L3_079_363G1_scaffold_542_24
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17670..21014)
DNA (3345bp) protein (1115aa)
Uncharacterized protein n=7 Tax=root RepID=A7V9C0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV27430.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_079_363G1_scaffold_542_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21434..22711
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I2U3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10539.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_079_363G1_scaffold_542_26
unknown

Not on your lists

22847..23002
DNA (156bp) protein (52aa)

This feature has no annotations

L3_079_363G1_scaffold_542_27
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23015..23467)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R5N9_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY36779.1}; Flags: Precursor;; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L3_079_363G1_scaffold_542_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23518..24738
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZPM8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY76987.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
putative transposase
L3_079_363G1_scaffold_542_29
unknown

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comp(24747..24881)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_079_363G1_scaffold_542_30
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25110..25685)
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B3X2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB56307.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Displaying items 1-30 of 37 in total

View Taxonomy