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L3_079_363G1_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_550_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..842)
DNA (840bp) protein (280aa)
Sortase A, LPXTG specific n=7 Tax=Bifidobacterium longum RepID=V6XWB6_BIFLN
srtA1; srta1
Sortase {ECO:0000313|EMBL:AIW43187.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_079_363G1_scaffold_550_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(905..1150)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9E9_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54558.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_079_363G1_scaffold_550_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1729..3012
DNA (1284bp) protein (428aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=V6XU52_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24324.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_079_363G1_scaffold_550_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3373..4137
DNA (765bp) protein (255aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Aspartokinase n=16 Tax=Bifidobacterium RepID=B3DUB1_BIFLD
aspartate kinase
L3_079_363G1_scaffold_550_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4193..4759
DNA (567bp) protein (189aa)
ACT domain protein {ECO:0000313|EMBL:CCK34105.1}; EC=2.7.2.4 {ECO:0000313|EMBL:CCK34105.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
ACT domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZ31_BIFLN
aspartate kinase
L3_079_363G1_scaffold_550_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4841..5935)
DNA (1095bp) protein (365aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AIW43190.1}; EC=1.2.1.11 {ECO:0000313|EMBL:AIW43190.1};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Aspartate semialdehyde dehydrogenase n=16 Tax=Bacteria RepID=D6DAM1_BIFLN
aspartate-semialdehyde dehydrogenase
L3_079_363G1_scaffold_550_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6103..6723
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=Q8G6Y9_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24320.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_079_363G1_scaffold_550_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6726..8306)
DNA (1581bp) protein (527aa)
Putative phosphohydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWY1_BIFL1
Putative phosphohydrolase {ECO:0000313|EMBL:BAP82807.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
phosphohydrolase
L3_079_363G1_scaffold_550_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8995..10911
DNA (1917bp) protein (639aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
2-isopropylmalate synthase n=2 Tax=Bifidobacterium longum RepID=B3DUA5_BIFLD
leuA; 2-isopropylmalate synthase
L3_079_363G1_scaffold_550_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10983..13448)
DNA (2466bp) protein (822aa)
Transglycosylase n=7 Tax=Bifidobacterium RepID=C5E9D8_BIFLI
Transglycosylase {ECO:0000313|EMBL:EIJ30883.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
penicillin-binding protein
L3_079_363G1_scaffold_550_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13951..14916
DNA (966bp) protein (322aa)
Peptidase n=15 Tax=Bifidobacterium RepID=F8AU47_BIFLN
peptidase
PAP2 family protein {ECO:0000313|EMBL:EEI81597.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_079_363G1_scaffold_550_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15040..18126
DNA (3087bp) protein (1029aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
DNA topoisomerase 1 n=8 Tax=Bifidobacterium RepID=Q8G6Z5_BIFLO
DNA topoisomerase I
L3_079_363G1_scaffold_550_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18404..19024
DNA (621bp) protein (207aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Thymidylate kinase n=8 Tax=Bifidobacterium RepID=E8MGC0_BIFL2
thymidylate kinase
L3_079_363G1_scaffold_550_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19021..20172
DNA (1152bp) protein (384aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
Possible DNA polymerase III delta prime subunit n=5 Tax=Bifidobacterium RepID=Q8G6Z7_BIFLO
DNA polymerase III subunit delta {ECO:0000313|EMBL:KEY23907.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_079_363G1_scaffold_550_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20291..20845
DNA (555bp) protein (185aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=V6XYW9_BIFLN
conserved hypothetical protein TIGR00481
Uncharacterized protein {ECO:0000313|EMBL:CBK71216.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_079_363G1_scaffold_550_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20988..22589
DNA (1602bp) protein (534aa)
Dipeptidase n=12 Tax=Bifidobacterium RepID=PEPD_BIFLO
Dipeptidase {ECO:0000313|EMBL:BAJ65826.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
dipeptidase
L3_079_363G1_scaffold_550_17
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22828..24231
DNA (1404bp) protein (468aa)
Formate-tetrahydrofolate ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0L1_9BIFI
Formate-tetrahydrofolate ligase {ECO:0000313|EMBL:EFV36626.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
thfS2; thfs2
L3_079_363G1_scaffold_550_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24628..24975)
DNA (348bp) protein (116aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=B3DU95_BIFLD
Macrophage migration inhibitory factor-related hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI98307.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_079_363G1_scaffold_550_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25177..25713
DNA (537bp) protein (179aa)
Predicted membrane protein n=11 Tax=Bifidobacterium RepID=D6DAK9_BIFLN
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:CBK71212.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_079_363G1_scaffold_550_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25761..27206)
DNA (1446bp) protein (482aa)
Major Facilitator Superfamily n=10 Tax=Bifidobacterium longum RepID=D6DAK8_BIFLN
transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ22077.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_079_363G1_scaffold_550_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27468..28127
DNA (660bp) protein (220aa)
Fructose-2,6-bisphosphatase n=9 Tax=Bifidobacterium RepID=D6DAK7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24305.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_079_363G1_scaffold_550_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28225..29184
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G705_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24304.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_079_363G1_scaffold_550_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29263..30180
DNA (918bp) protein (306aa)
Aldose 1-epimerase-like protein n=13 Tax=Bifidobacterium RepID=B3DU90_BIFLD
hypothetical protein
Aldose 1-epimerase {ECO:0000313|EMBL:EIJ22090.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_079_363G1_scaffold_550_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30298..31494)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GST2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEQ54532.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_079_363G1_scaffold_550_25
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31754..31852
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWZ8_BIFL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96013.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_079_363G1_scaffold_550_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32036..33556
DNA (1521bp) protein (507aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Glutamate--tRNA ligase n=14 Tax=Bifidobacterium RepID=SYE_BIFLD
glutamyl-tRNA synthetase
L3_079_363G1_scaffold_550_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34486..34974
DNA (489bp) protein (163aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=V6XYY2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54528.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_079_363G1_scaffold_550_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34926..35075)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9B8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54527.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_079_363G1_scaffold_550_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35371..41271
DNA (5901bp) protein (1967aa)
Endo-alpha-N-acetylgalactosaminidase, cell wall anchored n=1 Tax=Bifidobacterium longum E18 RepID=V6XU10_BIFLN
Serine protease {ECO:0000313|EMBL:KEY31863.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
endo-alpha-N-acetylgalactosaminidase
L3_079_363G1_scaffold_550_30
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41370..42254)
DNA (885bp) protein (295aa)
Predicted membrane protein n=8 Tax=Bifidobacterium RepID=D6DAK0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95231.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Displaying items 1-30 of 43 in total

View Taxonomy