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L3_079_363G1_scaffold_839

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_839_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..166
DNA (165bp) protein (55aa)
PepSY domain protein n=2 Tax=Bacteroides RepID=C6Z0F9_9BACE
iron uptake factor
Uncharacterized protein {ECO:0000313|EMBL:ABR38546.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_363G1_scaffold_839_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(260..607)
DNA (348bp) protein (116aa)
Mg2+/Co2+ transporter n=2 Tax=Bacteroides RepID=A6KYN1_BACV8
magnesium transporter CorA
CorA-like Mg2+ transporter family protein {ECO:0000313|EMBL:KDS27928.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_363G1_scaffold_839_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(613..1140)
DNA (528bp) protein (176aa)
CorA-like protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAV8_BACVU
CorA-like protein {ECO:0000313|EMBL:EFG17311.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
magnesium transporter CorA
L3_079_363G1_scaffold_839_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1647..2213
DNA (567bp) protein (189aa)
Peroxiredoxin {ECO:0000313|EMBL:KDS48336.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KDS48336.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Peroxiredoxin n=4 Tax=Bacteroides RepID=C6Z0G1_9BACE
alkyl hydroperoxide reductase subunit C
L3_079_363G1_scaffold_839_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2226..3776
DNA (1551bp) protein (517aa)
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:EFG17314.1}; EC=1.8.1.- {ECO:0000313|EMBL:EFG17314.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Alkyl hydroperoxide reductase, F subunit n=4 Tax=root RepID=C6Z0G2_9BACE
alkyl hydroperoxide reductase subunit F
L3_079_363G1_scaffold_839_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3916..4503
DNA (588bp) protein (196aa)
Sugar-binding domain protein n=8 Tax=Bacteroides RepID=C3R9V3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY78617.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
LacI family transcriptional regulator
L3_079_363G1_scaffold_839_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4457..4876
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HMJ9_9BACE
transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:EOR98634.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_363G1_scaffold_839_8
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4957..6522)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0G4_9BACE
Glycoside hydrolase family 5 {ECO:0000313|EMBL:EFV68911.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
beta-glycosidase
L3_079_363G1_scaffold_839_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6535..8133)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0G5_9BACE
O-Glycosyl hydrolase 30 family protein {ECO:0000313|EMBL:KDS48332.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
beta-glycosidase
L3_079_363G1_scaffold_839_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8250..9881)
DNA (1632bp) protein (544aa)
Outer membrane protein n=7 Tax=Bacteroides RepID=E5UPI7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY78620.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_363G1_scaffold_839_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9926..12964)
DNA (3039bp) protein (1013aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroides RepID=C6Z0G7_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET14385.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_079_363G1_scaffold_839_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12987..14486)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=7 Tax=root RepID=C6Z0G8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB22647.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
hypothetical protein
L3_079_363G1_scaffold_839_13
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14700..18740
DNA (4041bp) protein (1347aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Bacteroides RepID=D1K3U8_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEZ21736.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_079_363G1_scaffold_839_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18988..20727)
DNA (1740bp) protein (580aa)
Histidine acid phosphatase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAW9_BACVU
Histidine acid phosphatase {ECO:0000313|EMBL:EFG17322.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
histidine acid phosphatase
L3_079_363G1_scaffold_839_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20734..23013)
DNA (2280bp) protein (760aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX0_BACVU
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EFG17323.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
alpha-mannosidase
L3_079_363G1_scaffold_839_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23016..24428)
DNA (1413bp) protein (471aa)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX1_BACVU
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EFG17324.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycoside hydrolase
L3_079_363G1_scaffold_839_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24455..26788)
DNA (2334bp) protein (778aa)
Putative alpha-1,2-mannosidase n=2 Tax=Bacteroides RepID=C6Z0H3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV68920.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
alpha-mannosidase
L3_079_363G1_scaffold_839_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26808..27620)
DNA (813bp) protein (271aa)
Glycerophosphodiesterase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4J1_9BACE
Glycerophosphodiesterase {ECO:0000313|EMBL:CDF19770.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
glycerophosphodiester phosphodiesterase
L3_079_363G1_scaffold_839_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27694..29334)
DNA (1641bp) protein (547aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX4_BACVU
Putative lipoprotein {ECO:0000313|EMBL:EFG17327.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycan metabolism protein RagB
L3_079_363G1_scaffold_839_20
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29355..32315)
DNA (2961bp) protein (987aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=C6Z0H6_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EFV68923.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
TonB-dependent receptor
L3_079_363G1_scaffold_839_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32391..33509)
DNA (1119bp) protein (373aa)
Putative membrane protein n=2 Tax=Bacteroides RepID=D4VAX6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS27912.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
membrane protein
L3_079_363G1_scaffold_839_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33517..35775)
DNA (2259bp) protein (753aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Bacteroides RepID=C6Z0H8_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:EET14396.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
alpha-N-acetylglucosaminidase
L3_079_363G1_scaffold_839_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35864..40030)
DNA (4167bp) protein (1389aa)
Sensor histidine kinase/response regulator n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX8_BACVU
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EFG17331.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
histidine kinase
L3_079_363G1_scaffold_839_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40382..41368
DNA (987bp) protein (329aa)
Kinase, PfkB family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX9_BACVU
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS27909.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
PfkB family carbohydrate kinase
L3_079_363G1_scaffold_839_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41412..43106
DNA (1695bp) protein (565aa)
C-terminal processing peptidase family protein {ECO:0000313|EMBL:KDS54232.1}; EC=3.4.21.- {ECO:0000313|EMBL:KDS54232.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Carboxy-terminal processing protease n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYM0_BACV8
carboxy-terminal processing protease
L3_079_363G1_scaffold_839_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43172..45469)
DNA (2298bp) protein (766aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAY1_BACVU
Cna B-type domain protein {ECO:0000313|EMBL:KDS27907.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_079_363G1_scaffold_839_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45591..46976
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Two-component system sensor histidine kinase n=7 Tax=root RepID=A6KYL8_BACV8
two-component system sensor histidine kinase
L3_079_363G1_scaffold_839_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47001..47702
DNA (702bp) protein (234aa)
Two-component system response regulator n=4 Tax=root RepID=A6KYL7_BACV8
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY78628.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_363G1_scaffold_839_29
unknown

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47681..47818
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 29 items

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