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L3_079_363G1_scaffold_950

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_950_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1565)
DNA (1563bp) protein (521aa)
ATPases with chaperone activity, ATP-binding subunit n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2C8_BIFLN
Clp protease
Protease {ECO:0000313|EMBL:AAN23877.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_079_363G1_scaffold_950_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1716..2681
DNA (966bp) protein (322aa)
UspA1 n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R109_BIFLM
uspA1; uspa1
Universal stress protein {ECO:0000313|EMBL:AIW44087.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_079_363G1_scaffold_950_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2793..3980)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATW6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97054.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_079_363G1_scaffold_950_4
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3989..4378)
DNA (390bp) protein (130aa)
Cold shock protein n=17 Tax=Bifidobacterium RepID=B3DPK9_BIFLD
cold shock protein
Cold-shock' DNA-binding domain-containing protein {ECO:0000313|EMBL:EFV38213.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_079_363G1_scaffold_950_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4448..6439)
DNA (1992bp) protein (664aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Two-component sensor kinase n=11 Tax=Bifidobacterium RepID=E8MEI4_BIFL2
two-component sensor kinase
L3_079_363G1_scaffold_950_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6470..7246)
DNA (777bp) protein (259aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Bifidobacterium longum RepID=D6ZVL2_BIFLJ
winged helix family two component transcriptional regulator
Putative transcriptional regulatory protein TcrX {ECO:0000313|EMBL:CEF11928.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_079_363G1_scaffold_950_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7194..8045)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis RepID=Q7WYJ1_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ56149.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_079_363G1_scaffold_950_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8075..8365
DNA (291bp) protein (97aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DPK5_BIFLD
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_079_363G1_scaffold_950_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8462..10087)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=30 Tax=Bacteria RepID=CH60_BIFLD
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
chaperonin GroEL
L3_079_363G1_scaffold_950_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10325..10564)
DNA (240bp) protein (80aa)
Cold shock protein n=15 Tax=Bifidobacterium RepID=B3DPK3_BIFLD
hypothetical protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EIJ25114.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_079_363G1_scaffold_950_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10794..11477)
DNA (684bp) protein (228aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=B3DRQ4_BIFLD
hypothetical protein
Cell wall integrity and stress response protein 1 {ECO:0000313|EMBL:KHD94543.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_079_363G1_scaffold_950_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11593..12282
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Uracil-DNA glycosylase n=7 Tax=Bifidobacterium RepID=E8MEJ1_BIFL2
uracil-DNA glycosylase
L3_079_363G1_scaffold_950_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12322..13401
DNA (1080bp) protein (360aa)
Von Willebrand factor type A domain containing membrane protein n=10 Tax=Bifidobacterium RepID=B3DRQ2_BIFLD
Von Willebrand factor type A domain containing membrane protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67119.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_079_363G1_scaffold_950_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13398..14348
DNA (951bp) protein (317aa)
PF01882 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B2X2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97043.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_079_363G1_scaffold_950_15
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14345..14899
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I402_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV38224.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_079_363G1_scaffold_950_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14896..15954
DNA (1059bp) protein (353aa)
Von Willebrand factor type A-like protein n=10 Tax=Bifidobacterium RepID=B3DRP9_BIFLD
hypothetical protein
von Willebrand factor A {ECO:0000313|EMBL:KEY21649.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_079_363G1_scaffold_950_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15951..16982
DNA (1032bp) protein (344aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=Q8G3F4_BIFLO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71640.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_079_363G1_scaffold_950_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16952..17581
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVV6_BIFLN
cell surface protein
Uncharacterized protein {ECO:0000313|EMBL:EEI80561.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_079_363G1_scaffold_950_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17824..18171
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPQ8_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51788.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_079_363G1_scaffold_950_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18168..19772
DNA (1605bp) protein (535aa)
PGAP1-like domain protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3B2Z2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY33566.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L3_079_363G1_scaffold_950_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20539..21180)
DNA (642bp) protein (214aa)
Predicted membrane protein n=14 Tax=Bifidobacterium RepID=D6DBI9_BIFLN
hypothetical protein
Cobalt ABC transporter, permease protein {ECO:0000313|EMBL:EIJ25121.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_079_363G1_scaffold_950_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21313..22749
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:KEY33563.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KEY33563.1};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Adenylosuccinate lyase n=10 Tax=Bifidobacterium RepID=B3DRP1_BIFLD
adenylosuccinate lyase
L3_079_363G1_scaffold_950_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22890..23636
DNA (747bp) protein (249aa)
Hypothetical integral Membrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R0Y6_BIFLM
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CCK35419.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Displaying 23 items

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