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L3_079_363G1_scaffold_246

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_246_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..607)
DNA (606bp) protein (202aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase subunit alpha n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1H7_9FIRM
ATP synthase F1 subunit alpha
L3_079_363G1_scaffold_246_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(612..1115)
DNA (504bp) protein (168aa)
ATP synthase subunit delta n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLI5_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase F1 subunit delta
L3_079_363G1_scaffold_246_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1096..1602)
DNA (507bp) protein (169aa)
ATP synthase subunit b n=2 Tax=Roseburia RepID=C0FTZ2_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase F0 subunit B
L3_079_363G1_scaffold_246_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1622..1846)
DNA (225bp) protein (75aa)
ATP synthase F0, C subunit n=2 Tax=Roseburia RepID=C0FTZ3_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase F0 subunit C
L3_079_363G1_scaffold_246_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1895..2548)
DNA (654bp) protein (218aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0U1_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_246_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2906..6202)
DNA (3297bp) protein (1099aa)
SNF2 family N-terminal domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTZ5_9FIRM
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EEG93965.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
helicase SNF2 family protein
L3_079_363G1_scaffold_246_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6437..7729)
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G054_9FIRM
L3_079_363G1_scaffold_246_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7808..8479)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30581.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_079_363G1_scaffold_246_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8610..10370)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30580.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Na/Pi-cotransporter
L3_079_363G1_scaffold_246_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10541..11197)
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Roseburia RepID=C0G051_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate uptake regulator PhoU
L3_079_363G1_scaffold_246_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11222..11974)
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G050_9FIRM
L3_079_363G1_scaffold_246_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12064..12945)
DNA (882bp) protein (294aa)
Phosphate ABC transporter, permease protein PstA n=2 Tax=Roseburia RepID=C0G049_9FIRM
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EEG91919.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L3_079_363G1_scaffold_246_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12953..13810)
DNA (858bp) protein (286aa)
Phosphate ABC transporter, permease protein PstC n=2 Tax=Roseburia RepID=C0G048_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30576.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L3_079_363G1_scaffold_246_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13807..13929)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G047_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91917.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_079_363G1_scaffold_246_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14009..14977)
DNA (969bp) protein (323aa)
Putative Phosphate-binding protein PstS 2 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G046_9FIRM
Putative Phosphate-binding protein PstS 2 {ECO:0000313|EMBL:EEG91916.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_079_363G1_scaffold_246_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15080..16366)
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G045_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEG91915.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_079_363G1_scaffold_246_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16320..17381)
DNA (1062bp) protein (354aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G044_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EEG91914.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily protein
L3_079_363G1_scaffold_246_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17399..18187)
DNA (789bp) protein (263aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G043_9FIRM
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEG91913.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_079_363G1_scaffold_246_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18269..18850)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30571.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_246_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18973..21369)
DNA (2397bp) protein (799aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30570.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_246_21
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21597..23309)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TF03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64240.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_079_363G1_scaffold_246_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23464..23721)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31131.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Phosphotransferase System HPr (HPr) Family
L3_079_363G1_scaffold_246_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23737..25653)
DNA (1917bp) protein (639aa)
Phosphotransferase system II fructose specific protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=D7PJN9_9FIRM
Phosphotransferase system II fructose specific protein {ECO:0000313|EMBL:ADF57337.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L3_079_363G1_scaffold_246_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25672..26598)
DNA (927bp) protein (309aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=2 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G030_9FIRM
L3_079_363G1_scaffold_246_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26618..27367)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HSM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31134.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Transcriptional regulators of sugar metabolism
L3_079_363G1_scaffold_246_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27613..28218)
DNA (606bp) protein (202aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73 5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G028_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEG91898.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_079_363G1_scaffold_246_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28232..28780)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31136.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Sortase and related acyltransferases
L3_079_363G1_scaffold_246_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28825..29115)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ICH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60824.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
transcriptional regulator
L3_079_363G1_scaffold_246_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29117..29482)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42900.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_079_363G1_scaffold_246_30
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29796..30146
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DWY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84765.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
Displaying items 1-30 of 65 in total

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