ggKbase home page

L3_079_363G1_scaffold_900

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_900_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1111
DNA (1110bp) protein (370aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HIB4_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP-dependent protease ATP-binding subunit
L3_079_363G1_scaffold_900_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1162..3483
DNA (2322bp) protein (774aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Lon protease n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G069_9FIRM
ATP-dependent protease La
L3_079_363G1_scaffold_900_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3504..4118
DNA (615bp) protein (205aa)
Probable GTP-binding protein EngB n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HXJ3_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
GTPase EngB
L3_079_363G1_scaffold_900_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4279..5211
DNA (933bp) protein (311aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HYB3_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_900_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5507..7339
DNA (1833bp) protein (611aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HIA8_9FIRM
L3_079_363G1_scaffold_900_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8175..8771
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW95_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG93153.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Transcriptional regulator
L3_079_363G1_scaffold_900_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8774..9526
DNA (753bp) protein (251aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSC0_9FIRM
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBL09772.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_079_363G1_scaffold_900_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9920..10177)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FW91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29801.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_900_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10300..10842)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93148.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Uncharacterized protein conserved in cyanobacteria
L3_079_363G1_scaffold_900_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11206..13779
DNA (2574bp) protein (858aa)
Protein translocase subunit SecA n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW89_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
preprotein translocase subunit SecA
L3_079_363G1_scaffold_900_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14003..15997
DNA (1995bp) protein (665aa)
UvrABC system protein B n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW86_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
excinuclease ABC subunit B
L3_079_363G1_scaffold_900_12
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16046..18886
DNA (2841bp) protein (947aa)
UvrABC system protein A n=2 Tax=root RepID=G2T5B5_ROSHA
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
excinuclease ABC subunit A
L3_079_363G1_scaffold_900_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19399..20394
DNA (996bp) protein (332aa)
Cell shape determining protein, MreB/Mrl family n=2 Tax=Roseburia RepID=C0FW82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29718.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
rod shape-determining protein MreB
L3_079_363G1_scaffold_900_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20486..21280
DNA (795bp) protein (265aa)
Flagellar basal body rod protein FlgG n=2 Tax=Roseburia RepID=R5HY76_9FIRM
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:CCY29717.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar basal body rod protein FlgG
L3_079_363G1_scaffold_900_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21310..22125
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HYY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29716.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
fagellar hook-basal body proteins
L3_079_363G1_scaffold_900_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22157..22519
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FW78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29715.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_900_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22690..24897
DNA (2208bp) protein (736aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Helicase, RecD/TraA family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW77_9FIRM
helicase, RecD/TraA family protein
Displaying 17 items

View Taxonomy