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L3_079_363G1_scaffold_919

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_919_1
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..115
DNA (114bp) protein (38aa)
DNA-binding helix-turn-helix protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SS64_9FIRM
Transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EGX71024.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_079_363G1_scaffold_919_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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466..1077
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium difficile RepID=V5ZEN9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGG79487.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_079_363G1_scaffold_919_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1101..1661
DNA (561bp) protein (187aa)
Uncharacterized protein n=11 Tax=Firmicutes RepID=G1VWB8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCL00267.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Transcriptional regulator
L3_079_363G1_scaffold_919_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1737..3122
DNA (1386bp) protein (462aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VWB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCL00268.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
MATE efflux family protein
L3_079_363G1_scaffold_919_5
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3314..3733
DNA (420bp) protein (140aa)
Relatives found in conjugative transposons n=13 Tax=Firmicutes RepID=V5ZEK4_CLODI
putative conjugative transposon
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49987.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L3_079_363G1_scaffold_919_6
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3738..3977
DNA (240bp) protein (80aa)
Uncharacterized protein n=19 Tax=Firmicutes RepID=G1VWC1_9FIRM
putative conjugative transposon protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49985.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L3_079_363G1_scaffold_919_7
unknown

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4293..4394
DNA (102bp) protein (34aa)

This feature has no annotations

L3_079_363G1_scaffold_919_8
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4443..5624
DNA (1182bp) protein (394aa)
Metallo cofactor biosynthesis protein n=11 Tax=Streptococcus suis RepID=A4VXX3_STRSY
radical SAM superfamily protein
Metallo cofactor biosynthesis protein {ECO:0000313|EMBL:ADE32268.1}; TaxID=423211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis (strain GZ1).;"
L3_079_363G1_scaffold_919_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5621..7198
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30275.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
mdlB1; multidrug ABC transporter ATPase
L3_079_363G1_scaffold_919_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7517..8914
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQ65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30274.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Predicted Fe-S oxidoreductases
L3_079_363G1_scaffold_919_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8951..9931
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92174.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_079_363G1_scaffold_919_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10166..12112
DNA (1947bp) protein (649aa)
Arylsulfatase {ECO:0000313|EMBL:EEG92173.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEG92173.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Arylsulfatase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ53_9FIRM
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_079_363G1_scaffold_919_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12127..13155
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30271.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
aldo/keto reductase
L3_079_363G1_scaffold_919_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13168..13827
DNA (660bp) protein (220aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30270.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_919_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13843..15150)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQ61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30269.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_919_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15156..15860)
DNA (705bp) protein (235aa)
Sensory transduction protein LytT n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HL01_9FIRM
Sensory transduction protein LytT {ECO:0000313|EMBL:CCY30268.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sensory transduction protein LytT
L3_079_363G1_scaffold_919_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16038..16397)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30267.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_919_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16679..16828
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30266.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_919_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16828..17397
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30265.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_919_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17520..18053
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30264.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_919_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18081..18539
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30263.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_919_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18623..19069
DNA (447bp) protein (149aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZT5_9FIRM
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CCY30262.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_919_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19590..21173
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30261.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type dipeptide transport system, periplasmic component
L3_079_363G1_scaffold_919_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21209..23149
DNA (1941bp) protein (647aa)
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ27_9FIRM
Putative phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EEG92147.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
putative phosphonate C-P lyase system protein PhnK
L3_079_363G1_scaffold_919_25
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23142..24113
DNA (972bp) protein (324aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ26_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG92146.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
oppB; oligopeptide ABC transporter permease
L3_079_363G1_scaffold_919_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24130..24474
DNA (345bp) protein (115aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ25_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG92145.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Displaying 26 items

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