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L3_079_363G1_scaffold_1405

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_1405_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR78_9FIRM
L3_079_363G1_scaffold_1405_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(705..1004)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30177.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_1405_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1047..1187)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30177.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_079_363G1_scaffold_1405_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1240..2019
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=2 Tax=Roseburia RepID=C0FR80_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
RNA polymerase, sigma subunit, RpsG/SigG
L3_079_363G1_scaffold_1405_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2022..3626)
DNA (1605bp) protein (535aa)
Metallo-beta-lactamase domain protein n=2 Tax=Roseburia RepID=C0FR81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30179.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_079_363G1_scaffold_1405_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3776..4516)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=2 Tax=Roseburia RepID=R5HKA0_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sporulation sigma factor SigE
L3_079_363G1_scaffold_1405_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4485..5006)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I093_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30181.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
stage II sporulation protein G
L3_079_363G1_scaffold_1405_8
unknown

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comp(5062..5385)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_079_363G1_scaffold_1405_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5494..6681)
DNA (1188bp) protein (396aa)
Cell division protein FtsZ n=2 Tax=Roseburia RepID=C0FR85_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
cell division protein FtsZ
L3_079_363G1_scaffold_1405_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6877..7797)
DNA (921bp) protein (307aa)
POTRA domain protein, FtsQ-type n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR86_9FIRM
POTRA domain protein, FtsQ-type {ECO:0000313|EMBL:EEG94948.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Cell division septal protein
L3_079_363G1_scaffold_1405_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7800..8918)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HPY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30184.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
cell division membrane protein
L3_079_363G1_scaffold_1405_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8973..10376)
DNA (1404bp) protein (468aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR88_9FIRM
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L3_079_363G1_scaffold_1405_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10398..11366)
DNA (969bp) protein (323aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I097_9FIRM
L3_079_363G1_scaffold_1405_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11431..13146)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30187.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
peptidoglycan glycosyltransferase
L3_079_363G1_scaffold_1405_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13209..14996)
DNA (1788bp) protein (596aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR91_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEG94953.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
peptidoglycan glycosyltransferase
Displaying 15 items

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