ggKbase home page

L3_079_363G1_scaffold_1639

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_1639_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
SsrA-binding protein n=2 Tax=Roseburia RepID=C0FPS0_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
tmRNA-binding protein
L3_079_363G1_scaffold_1639_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(266..2452)
DNA (2187bp) protein (729aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPS1_9FIRM
L3_079_363G1_scaffold_1639_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2552..2791)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I331_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31176.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
preprotein translocase subunit SecG
L3_079_363G1_scaffold_1639_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2857..3033)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FPS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31177.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1639_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3090..3530)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31178.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1639_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3546..4784)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HSR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31179.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
DNA-binding transcriptional activator of the SARP family
L3_079_363G1_scaffold_1639_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5045..6016
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95408.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_079_363G1_scaffold_1639_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6034..7062
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31182.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Type II secretory pathway, component PulF
L3_079_363G1_scaffold_1639_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7090..7413
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31183.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1639_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7418..7909
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HSR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31184.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1639_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7928..8386
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HN64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31185.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1639_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8379..8891
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I338_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31186.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1639_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8911..9981
DNA (1071bp) protein (357aa)
Twitching motility protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPT5_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EEG95415.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
pilus retraction protein PilT
L3_079_363G1_scaffold_1639_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9986..11347)
DNA (1362bp) protein (454aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPT6_9FIRM
L3_079_363G1_scaffold_1639_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11469..12056
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80053.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
Displaying 15 items

View Taxonomy