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L3_079_363G1_scaffold_1747

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_1747_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..544)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30375.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Integral membrane protein CcmA involved in cell shape determination
L3_079_363G1_scaffold_1747_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(568..1551)
DNA (984bp) protein (328aa)
Polysaccharide deacetylase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQI4_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EEG95206.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted xylanase/chitin deacetylase
L3_079_363G1_scaffold_1747_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1740..3431)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HL84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30373.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Methyl-accepting chemotaxis protein
L3_079_363G1_scaffold_1747_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3644..4579)
DNA (936bp) protein (312aa)
Elongation factor Ts n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I055_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
translation elongation factor Ts (EF-Ts)
L3_079_363G1_scaffold_1747_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4659..5399)
DNA (741bp) protein (247aa)
30S ribosomal protein S2 n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0R0_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
rpsB; 30S ribosomal protein S2
L3_079_363G1_scaffold_1747_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5571..6164)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95202.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_079_363G1_scaffold_1747_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6161..6919)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30369.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1747_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6931..7248)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HL81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30368.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1747_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7260..8030)
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=2 Tax=Roseburia RepID=C0FQH5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
L3_079_363G1_scaffold_1747_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8051..8320)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FQH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30366.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1747_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8354..8839)
DNA (486bp) protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Probable chemoreceptor glutamine deamidase CheD n=2 Tax=Roseburia RepID=C0FQH3_9FIRM
chemotaxis protein
L3_079_363G1_scaffold_1747_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8849..9478)
DNA (630bp) protein (210aa)
CheC-like family protein n=2 Tax=Roseburia RepID=C0FQH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30364.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Chemotaxis protein CheC, inhibitor of MCP methylation
L3_079_363G1_scaffold_1747_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9549..10010)
DNA (462bp) protein (154aa)
Chemotaxis signal transduction protein n=2 Tax=Roseburia RepID=R5HL76_9FIRM
Chemotaxis signal transduction protein {ECO:0000313|EMBL:CCY30363.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Chemotaxis signal transduction protein
L3_079_363G1_scaffold_1747_14
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10025..11251)
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Putative CheA signal transduction histidine kinase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3F8_ROSHA
putative CheA signal transduction histidine kinase
Displaying 14 items

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