ggKbase home page

L3_079_363G1_scaffold_1966

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_1966_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..444
DNA (444bp) protein (148aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Roseburia RepID=C0FW64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29088.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative tRNA/rRNA methyltransferase
L3_079_363G1_scaffold_1966_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

511..1161
DNA (651bp) protein (217aa)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EEG93229.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EEG93229.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase factor sigma-70 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW65_9FIRM
L3_079_363G1_scaffold_1966_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1763..2485
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HH76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29090.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_079_363G1_scaffold_1966_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2457..4574
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HX95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29091.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sensor histidine kinase
L3_079_363G1_scaffold_1966_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4918..5820
DNA (903bp) protein (301aa)
S1 RNA binding domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW69_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EEG93233.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Ribosomal protein S1
L3_079_363G1_scaffold_1966_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5919..6923)
DNA (1005bp) protein (335aa)
Putative HTH-type transcriptional repressor PurR n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HYU7_9FIRM
Putative HTH-type transcriptional repressor PurR {ECO:0000313|EMBL:CCY33334.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Transcriptional regulators
L3_079_363G1_scaffold_1966_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7093..7641
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30233.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_363G1_scaffold_1966_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7696..8307
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FW73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30232.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
uridine kinase
L3_079_363G1_scaffold_1966_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8394..9278)
DNA (885bp) protein (295aa)
Aldose 1-epimerase n=2 Tax=Roseburia RepID=C0FW75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30231.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
aldose 1-epimerase
Displaying 9 items

View Taxonomy