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L3_082_000G1_scaffold_9012

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_9012_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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49..1263
DNA (1215bp) protein (405aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Cysteine desulfurase, SufS subfamily n=5 Tax=Bacteroidales RepID=C7X5L9_9PORP
aminotransferase
L3_082_000G1_scaffold_9012_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1350..1664
DNA (315bp) protein (105aa)
Putative transmembrane protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IKZ9_9PORP
Putative transmembrane protein {ECO:0000313|EMBL:CDB47099.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
transmembrane protein
L3_082_000G1_scaffold_9012_3
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1701..1886
DNA (186bp) protein (62aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Ribonuclease HII n=8 Tax=Bacteroidales RepID=RNH2_PARD8
L3_082_000G1_scaffold_9012_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1883..2233
DNA (351bp) protein (117aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDM2_9BACE
L3_082_000G1_scaffold_9012_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2351..2548)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LHT3_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45247.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_000G1_scaffold_9012_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2561..3550)
DNA (990bp) protein (330aa)
Leucine aminopeptidase n=2 Tax=Parabacteroides distasonis RepID=A6LHT4_PARD8
Leucine aminopeptidase {ECO:0000313|EMBL:KDS57217.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
leucine aminopeptidase
L3_082_000G1_scaffold_9012_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3564..5168)
DNA (1605bp) protein (535aa)
Renal dipeptidase family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDL9_9BACE
Glutamine amidotransferase class-I family protein {ECO:0000313|EMBL:KDS57129.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
glutamine amidotransferase
L3_082_000G1_scaffold_9012_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5235..6998)
DNA (1764bp) protein (588aa)
Renal dipeptidase family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDL8_9BACE
Glutamine amidotransferase class-I family protein {ECO:0000313|EMBL:KDS57153.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
glutamine amidotransferase
L3_082_000G1_scaffold_9012_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7078..9033)
DNA (1956bp) protein (652aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
DNA gyrase subunit B n=6 Tax=Bacteroidales RepID=C7X5M6_9PORP
DNA gyrase subunit B
L3_082_000G1_scaffold_9012_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9312..9566)
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=9 Tax=Bacteroidales RepID=RS20_PARD8
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_082_000G1_scaffold_9012_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9796..10200)
DNA (405bp) protein (135aa)
Membrane protein n=3 Tax=Bacteroidales RepID=D7IME8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN21875.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_082_000G1_scaffold_9012_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10245..11003
DNA (759bp) protein (253aa)
DNA repair protein RecO n=3 Tax=Bacteroidales RepID=K6ADV7_9PORP
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
Displaying 12 items

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