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L3_082_000G1_scaffold_1130

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_1130_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

117..1367
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IV62_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07790.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_000G1_scaffold_1130_2
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1521..3569
DNA (2049bp) protein (683aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IV63_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07791.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_000G1_scaffold_1130_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3600..4250
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEV3_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44217.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_000G1_scaffold_1130_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4355..5329)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5YWK3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN18687.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hemolysin A
L3_082_000G1_scaffold_1130_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5342..6166)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ASI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN18688.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_082_000G1_scaffold_1130_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6643..7560
DNA (918bp) protein (306aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Parabacteroides distasonis RepID=RSMH_PARD8
mraW; S-adenosyl-methyltransferase MraW
L3_082_000G1_scaffold_1130_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7573..7926
DNA (354bp) protein (118aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEU9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS59517.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_000G1_scaffold_1130_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7945..10140
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A4R6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN18691.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
penicillin-binding protein
L3_082_000G1_scaffold_1130_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10143..11603
DNA (1461bp) protein (487aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Parabacteroides sp. D25 RepID=K6BDY2_9PORP
L3_082_000G1_scaffold_1130_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11617..12876
DNA (1260bp) protein (420aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Bacteroidales RepID=MRAY_PARD8
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
L3_082_000G1_scaffold_1130_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12892..14217
DNA (1326bp) protein (442aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=2 Tax=Parabacteroides distasonis RepID=A6LEU5_PARD8
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L3_082_000G1_scaffold_1130_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14229..15536
DNA (1308bp) protein (436aa)
Rod shape-determining protein rodA n=2 Tax=Parabacteroides distasonis RepID=A6LEU4_PARD8
rod shape-determining protein RodA
Rod shape-determining protein rodA {ECO:0000313|EMBL:ABR44208.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_000G1_scaffold_1130_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15533..16639
DNA (1107bp) protein (369aa)
murG; UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=Parabacteroides distasonis RepID=MURG_PARD8
L3_082_000G1_scaffold_1130_14
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16645..18033
DNA (1389bp) protein (463aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
UDP-N-acetylmuramate--L-alanine ligase n=7 Tax=Bacteroidales RepID=MURC_PARD8
L3_082_000G1_scaffold_1130_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18030..18758
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XDB3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49866.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
cell division protein FtsQ
L3_082_000G1_scaffold_1130_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18764..20122
DNA (1359bp) protein (453aa)
Cell division protein ftsA n=4 Tax=Bacteroidales RepID=D0TI59_9BACE
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
cell division protein FtsA
L3_082_000G1_scaffold_1130_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20156..21520
DNA (1365bp) protein (455aa)
Cell division protein FtsZ n=7 Tax=Bacteroidales RepID=A6LET9_PARD8
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_000G1_scaffold_1130_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21540..21989
DNA (450bp) protein (150aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LET8_PARD8
hypothetical protein
YqeY-like protein {ECO:0000313|EMBL:EEU49863.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_000G1_scaffold_1130_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22096..23505
DNA (1410bp) protein (470aa)
Carbon starvation protein CstA n=1 Tax=Parabacteroides sp. D13 RepID=C7XDA9_9PORP
Carbon starvation protein CstA {ECO:0000313|EMBL:EEU49862.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
carbon starvation protein A
L3_082_000G1_scaffold_1130_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23559..24290)
DNA (732bp) protein (244aa)
Two-component response regulator n=12 Tax=Bacteroidales RepID=A6LET6_PARD8
two-component response regulator
Transcriptional regulatory protein RprY {ECO:0000313|EMBL:EEU49861.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_000G1_scaffold_1130_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24293..25852)
DNA (1560bp) protein (520aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=7 Tax=Bacteroidales RepID=D0TI54_9BACE
two-component system sensor histidine kinase
L3_082_000G1_scaffold_1130_22
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26117..28987)
DNA (2871bp) protein (957aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=A6LET4_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ84399.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_082_000G1_scaffold_1130_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29067..29699)
DNA (633bp) protein (211aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroidales RepID=D7IV84_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI07812.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
RNA polymerase ECF-type sigma factor
L3_082_000G1_scaffold_1130_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29890..30948
DNA (1059bp) protein (353aa)
FecR/PupR family sigma factor regulatory protein n=3 Tax=Bacteroidales RepID=D7IV85_9BACE
FecR/PupR family sigma factor regulatory protein {ECO:0000313|EMBL:EFI07813.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
anti-sigma factor
L3_082_000G1_scaffold_1130_25
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31131..34391
DNA (3261bp) protein (1087aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides RepID=K6ASK2_9PORP
Outer membrane protein {ECO:0000313|EMBL:CDB48170.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_082_000G1_scaffold_1130_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34409..36097
DNA (1689bp) protein (563aa)
RagB/SusD domain-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IV87_9BACE
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFI07815.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_000G1_scaffold_1130_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36114..36785
DNA (672bp) protein (224aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=E1YX51_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61543.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
glycosylhydrolase
L3_082_000G1_scaffold_1130_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36799..38310
DNA (1512bp) protein (504aa)
NADH-dependent dehydrogenase n=2 Tax=Bacteroidales RepID=D7IV89_9BACE
NADH-dependent dehydrogenase {ECO:0000313|EMBL:EFI07817.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
dehydrogenase
L3_082_000G1_scaffold_1130_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38503..38967
DNA (465bp) protein (155aa)
RNA polymerase ECF-type sigma factor n=4 Tax=Bacteroidales RepID=A6LES7_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI07818.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_082_000G1_scaffold_1130_30
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39037..40047
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ASK6_9PORP
Transmembrane sensor/regulatory protein {ECO:0000313|EMBL:CDB48175.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
anti-sigma factor
Displaying items 1-30 of 56 in total

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