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L3_082_000G1_scaffold_30

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Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_30_1
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

164..3460
DNA (3297bp) protein (1099aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JK31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34570.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_082_000G1_scaffold_30_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3719..5173
DNA (1455bp) protein (485aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57525.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_082_000G1_scaffold_30_3
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5234..7051)
DNA (1818bp) protein (606aa)
Transcriptional regulator, LuxR family n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE66_9FIRM
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFY04885.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_082_000G1_scaffold_30_4
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7081..8460)
DNA (1380bp) protein (460aa)
ABC transporter solute-binding protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XX39_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDD10842.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
carbohydrate ABC transporter substrate-binding protein
L3_082_000G1_scaffold_30_5
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8827..10341
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WI88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD10843.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_082_000G1_scaffold_30_6
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10799..11902
DNA (1104bp) protein (368aa)
Zinc finger domain protein, LSD1 subclass n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE70_9FIRM
Zinc finger domain protein, LSD1 subclass {ECO:0000313|EMBL:EFY04889.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L3_082_000G1_scaffold_30_7
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11915..12694
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY04890.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L3_082_000G1_scaffold_30_8
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12769..13071
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XX42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD10847.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_000G1_scaffold_30_9
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13205..14116)
DNA (912bp) protein (304aa)
ABC transporter, substrate-binding protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE73_9FIRM
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EFY04892.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
ABC transporter
L3_082_000G1_scaffold_30_10
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14308..14973
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE74_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFY04893.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
ABC transporter
L3_082_000G1_scaffold_30_11
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14973..15770
DNA (798bp) protein (266aa)
ABC 3 transport family protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WN38_9FIRM
ABC 3 transport family protein {ECO:0000313|EMBL:CDD10850.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
ABC transporter
L3_082_000G1_scaffold_30_12
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15786..16226
DNA (441bp) protein (147aa)
Transcriptional regulator Fur family n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XZT0_9FIRM
Transcriptional regulator Fur family {ECO:0000313|EMBL:CDD11737.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
transcriptional regulator
L3_082_000G1_scaffold_30_13
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


16359..16643
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LE32_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
rpsF; 30S ribosomal protein S6
L3_082_000G1_scaffold_30_14
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16647..17075
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE33_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
single-strand binding protein
L3_082_000G1_scaffold_30_15
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


17094..17324
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LE34_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
30S ribosomal protein S18
L3_082_000G1_scaffold_30_16
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17473..18177
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WLE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD11958.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_000G1_scaffold_30_17
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18219..18704
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY04901.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L3_082_000G1_scaffold_30_18
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18867..19973
DNA (1107bp) protein (369aa)
Ribosome-binding ATPase YchF n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE37_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
GTP-binding protein YchF
L3_082_000G1_scaffold_30_19

Not on your lists

20275..21726
DNA (1452bp) protein (484aa)
Putative transcriptional regulator n=1 Tax=uncultured bacterium RepID=S6CPM4_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:CCG05865.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcriptional regulator
L3_082_000G1_scaffold_30_20
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22146..22907
DNA (762bp) protein (254aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6Y0D5_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CDD11942.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Cobyrinic acid ac-diamide synthase
L3_082_000G1_scaffold_30_21
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22900..23892
DNA (993bp) protein (331aa)
ParB-like protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE81_9FIRM
ParB-like protein {ECO:0000313|EMBL:EFY04845.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
parB-like partition protein
L3_082_000G1_scaffold_30_22
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23982..24458
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WRC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD11940.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_082_000G1_scaffold_30_23
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24543..24956)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WYD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD11939.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_000G1_scaffold_30_24
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25322..26494
DNA (1173bp) protein (391aa)
Receptor family ligand-binding protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE84_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:EFY04848.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
extracellular ligand-binding receptor
L3_082_000G1_scaffold_30_25
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26657..27832
DNA (1176bp) protein (392aa)
Ligand-binding protein receptor family n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6Y0D1_9FIRM
Ligand-binding protein receptor family {ECO:0000313|EMBL:CDD11937.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_082_000G1_scaffold_30_26
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27958..28848
DNA (891bp) protein (297aa)
High-affinity branched-chain amino acid ABC transporter permease protein LivH n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X6N8_9FIRM
High-affinity branched-chain amino acid ABC transporter permease protein LivH {ECO:0000313|EMBL:CDD11936.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
inner-membrane translocator
L3_082_000G1_scaffold_30_27
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28860..29819
DNA (960bp) protein (320aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE87_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFY04851.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
livM; inner-membrane translocator
L3_082_000G1_scaffold_30_28
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29794..30567
DNA (774bp) protein (258aa)
ABC transporter ATP-binding protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WYC8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD11934.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
ABC transporter
L3_082_000G1_scaffold_30_29
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30567..31271
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LE89_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFY04853.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
ABC transporter
L3_082_000G1_scaffold_30_30
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31367..32026
DNA (660bp) protein (220aa)
CBS domain protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE90_9FIRM
CBS domain protein {ECO:0000313|EMBL:EFY04854.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
Displaying items 1-30 of 170 in total

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