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L3_082_000G1_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_79_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..562
DNA (561bp) protein (187aa)
Nucleotide sugar dehydrogenase n=1 Tax=Coprobacillus sp. D7 RepID=C3RRA4_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EHM93146.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
nucleotide sugar dehydrogenase
L3_082_000G1_scaffold_79_2
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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578..1687
DNA (1110bp) protein (370aa)
rfaG; glycosyltransferase (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EFQ2_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEJ74805.1}; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;"
L3_082_000G1_scaffold_79_3
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1695..2714
DNA (1020bp) protein (340aa)
rfaG; Glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8ILD1_LACSC
Glycosyltransferase {ECO:0000313|EMBL:AKI04468.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_082_000G1_scaffold_79_4
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3152..4180
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FHJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE14310.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
polysaccharide pyruvyl transferase
L3_082_000G1_scaffold_79_5
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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4228..5757
DNA (1530bp) protein (510aa)
Polysaccharide biosynthesis protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BSS8_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDA63994.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_082_000G1_scaffold_79_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5754..6902
DNA (1149bp) protein (383aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4Q9_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDA10663.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
coenzyme F420 hydrogenase
L3_082_000G1_scaffold_79_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6904..7791
DNA (888bp) protein (296aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYM4_9FIRM
L3_082_000G1_scaffold_79_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8257..11325
DNA (3069bp) protein (1023aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N431_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19203.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
filamentous haemagglutinin-like protein
L3_082_000G1_scaffold_79_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11585..12082
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N432_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19204.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_082_000G1_scaffold_79_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12136..13275)
DNA (1140bp) protein (380aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=5 Tax=Erysipelotrichaceae RepID=B0N433_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDS19205.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_082_000G1_scaffold_79_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13442..13765
DNA (324bp) protein (108aa)
Anti-sigma factor antagonist n=4 Tax=Erysipelotrichaceae RepID=B0N434_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
spoIIAA; anti-sigma F factor antagonist
L3_082_000G1_scaffold_79_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13765..14199
DNA (435bp) protein (145aa)
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=5 Tax=Erysipelotrichaceae RepID=B0N435_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CCZ34329.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_082_000G1_scaffold_79_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14192..14914
DNA (723bp) protein (241aa)
RNA polymerase sigma factor n=5 Tax=Erysipelotrichaceae RepID=B0N436_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
sporulation sigma factor SigF
L3_082_000G1_scaffold_79_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14945..15460
DNA (516bp) protein (172aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Signal peptidase I n=5 Tax=Erysipelotrichaceae RepID=B0N437_9FIRM
signal peptidase I
L3_082_000G1_scaffold_79_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15575..16108
DNA (534bp) protein (178aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=4 Tax=Erysipelotrichaceae RepID=B0N438_9FIRM
L3_082_000G1_scaffold_79_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16258..18012
DNA (1755bp) protein (585aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N439_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19211.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_082_000G1_scaffold_79_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18144..19541
DNA (1398bp) protein (466aa)
Polysaccharide deacetylase n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N440_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EDS19212.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Predicted xylanase/chitin deacetylase
L3_082_000G1_scaffold_79_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19595..20614
DNA (1020bp) protein (340aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N441_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48019.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Sporulation integral membrane protein
L3_082_000G1_scaffold_79_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20670..21608
DNA (939bp) protein (313aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N442_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34340.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Tocopherol cyclase
L3_082_000G1_scaffold_79_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21692..22216
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=4 Tax=Erysipelotrichaceae RepID=B0N443_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91695.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
GCN5-related N-acetyltransferase
L3_082_000G1_scaffold_79_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22292..23143
DNA (852bp) protein (284aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=4 Tax=Erysipelotrichaceae RepID=B0N444_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EHQ48022.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_082_000G1_scaffold_79_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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23145..24440
DNA (1296bp) protein (432aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=3 Tax=Erysipelotrichaceae RepID=B0N445_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EDS19217.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Na+/H+-dicarboxylate symporters
L3_082_000G1_scaffold_79_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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24506..25282
DNA (777bp) protein (259aa)
Pentapeptide repeat protein n=5 Tax=Erysipelotrichaceae RepID=B0N446_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34439.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_082_000G1_scaffold_79_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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25310..26878
DNA (1569bp) protein (523aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N447_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91699.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_082_000G1_scaffold_79_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(26875..27528)
DNA (654bp) protein (218aa)
Acetyltransferase, GNAT family n=5 Tax=Erysipelotrichaceae RepID=B0N448_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35911.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_082_000G1_scaffold_79_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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27599..28408
DNA (810bp) protein (270aa)
Putative multidrug-efflux transporter 2 regulator n=2 Tax=Erysipelotrichaceae RepID=B0N449_9FIRM
Putative multidrug-efflux transporter 2 regulator {ECO:0000313|EMBL:EDS19221.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
MerR family transcriptional regulator
L3_082_000G1_scaffold_79_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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28516..29628
DNA (1113bp) protein (371aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EDS19222.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EDS19222.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Methionine synthase II (cobalamin-independent) (EC:2.1.1.14)
Methionine synthase, vitamin-B12 independent n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N450_9FIRM
L3_082_000G1_scaffold_79_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29628..31895
DNA (2268bp) protein (756aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N451_9FIRM
L3_082_000G1_scaffold_79_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31939..32856
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=5 Tax=Erysipelotrichaceae RepID=B0N452_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS19224.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
regulatory protein LysR
L3_082_000G1_scaffold_79_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32937..33758
DNA (822bp) protein (274aa)
AraC-like ligand binding domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N453_9FIRM
AraC-like ligand binding domain protein {ECO:0000313|EMBL:EDS19225.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DNA-binding domain-containing protein
Displaying items 1-30 of 140 in total

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