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L3_082_000G1_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_115_1
unknown

Not on your lists

comp(438..587)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_082_000G1_scaffold_115_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(720..1010)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5HUK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66794.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_082_000G1_scaffold_115_3
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1098..2564)
DNA (1467bp) protein (489aa)
ABC superfamily ATP binding cassette transporter n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FLH3_9FIRM
ABC superfamily ATP binding cassette transporter {ECO:0000313|EMBL:CCY04484.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
ABC transporter ATP-binding protein
L3_082_000G1_scaffold_115_4
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3371..3880
DNA (510bp) protein (170aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9W1C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25524.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_082_000G1_scaffold_115_5
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3928..5463
DNA (1536bp) protein (512aa)
ImpB/MucB/SamB family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEH6_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EET60959.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_082_000G1_scaffold_115_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5460..6005
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG57598.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_082_000G1_scaffold_115_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6000..7394)
DNA (1395bp) protein (465aa)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase {ECO:0000256|HAMAP-Rule:MF_00397}; Short=2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase {ECO:0000256|HAMAP-Rule:MF_00397};; EC=2.4.2.52 {ECO:0000256|HAMAP-Rule:MF_00397};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
holo-ACP synthase CitX/triphosphoribosyl-dephospho-CoA synthase CitG (EC:2.7.8.25)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDU0_9CLOT
L3_082_000G1_scaffold_115_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7620..8333
DNA (714bp) protein (238aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9U2_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEG51887.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Two-component system transcriptional regulator
L3_082_000G1_scaffold_115_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8335..9210
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XH16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99373.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_082_000G1_scaffold_115_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9207..9968
DNA (762bp) protein (254aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG51924.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_082_000G1_scaffold_115_11
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10057..11307
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IEL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS19310.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_082_000G1_scaffold_115_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11456..12343)
DNA (888bp) protein (296aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EFQ08451.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFQ08451.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED3_9FIRM
L3_082_000G1_scaffold_115_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12392..13060)
DNA (669bp) protein (223aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=5 Tax=Clostridiales RepID=A5KJD4_9FIRM
L-serine dehydratase {ECO:0000313|EMBL:CCZ27008.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_082_000G1_scaffold_115_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13075..14289)
DNA (1215bp) protein (405aa)
Sodium:dicarboxylate symporter n=2 Tax=Clostridiales RepID=R5NQD5_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:ERI89839.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Na+/H+-dicarboxylate symporters
L3_082_000G1_scaffold_115_15
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14534..15415
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63585.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Transcriptional regulator
L3_082_000G1_scaffold_115_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15739..16401
DNA (663bp) protein (221aa)
ATP synthase subunit a n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYM6_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP synthase F0 subunit A
L3_082_000G1_scaffold_115_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16460..16681
DNA (222bp) protein (74aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RTX5_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ATP synthase F0 subunit C
L3_082_000G1_scaffold_115_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16729..17220
DNA (492bp) protein (164aa)
ATP synthase subunit b n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIC9_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP synthase F0 subunit B
L3_082_000G1_scaffold_115_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17213..17719
DNA (507bp) protein (169aa)
ATP synthase subunit delta n=1 Tax=Clostridium sp. CAG:7 RepID=R5INF3_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP synthase F1 subunit delta
L3_082_000G1_scaffold_115_20
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17738..19276
DNA (1539bp) protein (513aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ATP synthase subunit alpha n=4 Tax=Clostridium RepID=N9YR68_9CLOT
ATP synthase F1 subunit alpha
L3_082_000G1_scaffold_115_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19243..20133
DNA (891bp) protein (297aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5II31_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_082_000G1_scaffold_115_22
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20149..21549
DNA (1401bp) protein (467aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ATP synthase subunit beta n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUR7_9FIRM
F-type H+-transporting ATPase subunit beta
L3_082_000G1_scaffold_115_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21586..22014
DNA (429bp) protein (143aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5INE2_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_082_000G1_scaffold_115_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22148..22717)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z957_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44893.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_082_000G1_scaffold_115_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22760..23650)
DNA (891bp) protein (297aa)
LysR transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYL2_9CLOT
LysR transcriptional regulator {ECO:0000313|EMBL:CCY41817.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcriptional regulator
L3_082_000G1_scaffold_115_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23890..25656
DNA (1767bp) protein (589aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EEQ57466.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EEQ57466.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGY1_9FIRM
L3_082_000G1_scaffold_115_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25580..26554)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJ33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98539.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Transcriptional regulator
L3_082_000G1_scaffold_115_28
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26743..27573
DNA (831bp) protein (277aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTI9_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG57484.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_082_000G1_scaffold_115_29
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27570..28352
DNA (783bp) protein (261aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTJ0_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG57485.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type spermidine/putrescine transport system, permease component II
L3_082_000G1_scaffold_115_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28366..29406
DNA (1041bp) protein (347aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQY2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ60426.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC-type spermidine/putrescine transport systems, ATPase components
Displaying items 1-30 of 105 in total

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