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L3_082_000G1_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_133_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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565..813
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HPN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30064.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
iron-only hydrogenase system regulator
L3_082_000G1_scaffold_133_2
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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817..1878
DNA (1062bp) protein (354aa)
HydE n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VI50_CLOSH
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:AGC67710.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_082_000G1_scaffold_133_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1934..3358
DNA (1425bp) protein (475aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3S4_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEG54005.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
iron-only hydrogenase maturation protein HydG
L3_082_000G1_scaffold_133_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3499..4707
DNA (1209bp) protein (403aa)
Small GTP-binding protein n=4 Tax=Clostridium RepID=E7GNP7_CLOSY
Small GTP-binding protein {ECO:0000313|EMBL:EGA93656.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_082_000G1_scaffold_133_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4756..5670)
DNA (915bp) protein (305aa)
Putative membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENA1_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEQ59613.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted permease, DMT superfamily
L3_082_000G1_scaffold_133_6
unknown

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comp(5923..6084)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_082_000G1_scaffold_133_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6135..6776)
DNA (642bp) protein (214aa)
Predicted sugar-phosphate isomerase n=3 Tax=Clostridium acetobutylicum RepID=Q97FX0_CLOAB
Uncharacterized protein {ECO:0000313|EMBL:KEZ89994.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_082_000G1_scaffold_133_8
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6773..7708)
DNA (936bp) protein (312aa)
Transketolase, pyridine binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB75_9CLOT
Transketolase {ECO:0000313|EMBL:KEZ89995.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
putative transketolase
L3_082_000G1_scaffold_133_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7705..8520)
DNA (816bp) protein (272aa)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB76_9CLOT
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEG51418.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative transketolase
L3_082_000G1_scaffold_133_10
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8537..9526)
DNA (990bp) protein (330aa)
Putative ABC-type sugar transport system, permease component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTF7_SPHPG
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:EXG85236.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
putative ABC-type sugar transport system, permease component
L3_082_000G1_scaffold_133_11
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9544..11052)
DNA (1509bp) protein (503aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXQ8_9CLOT
D-ribose transporter ATP-binding protein {ECO:0000313|EMBL:KEZ89998.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC transporter related protein
L3_082_000G1_scaffold_133_12
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11101..12093)
DNA (993bp) protein (331aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTF5_SPHPG
Uncharacterized protein {ECO:0000313|EMBL:KEZ89999.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
sugar ABC transporter periplasmic protein
L3_082_000G1_scaffold_133_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12400..13095)
DNA (696bp) protein (232aa)
FCD domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB77_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EXG85232.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
GntR domain-containing protein
L3_082_000G1_scaffold_133_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13903..14382)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39556.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_082_000G1_scaffold_133_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14604..15326)
DNA (723bp) protein (241aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBY4_9CLOT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CCY39555.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_082_000G1_scaffold_133_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15447..17132)
DNA (1686bp) protein (562aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97285.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
glycoside hydrolase
L3_082_000G1_scaffold_133_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17371..17625)
DNA (255bp) protein (85aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RPZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17113.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_082_000G1_scaffold_133_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17713..18303)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39551.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_082_000G1_scaffold_133_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18294..19733)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39550.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
serine/threonine protein kinase
L3_082_000G1_scaffold_133_20
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19953..20693
DNA (741bp) protein (247aa)
Genetic competence negative regulator n=4 Tax=Clostridium RepID=N9YQG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98535.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
negative regulator of genetic competence
L3_082_000G1_scaffold_133_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21443..21643)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39546.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_082_000G1_scaffold_133_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22019..24112
DNA (2094bp) protein (698aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEQ58883.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEQ58883.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF95_9FIRM
L3_082_000G1_scaffold_133_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24252..24497
DNA (246bp) protein (82aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RQ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26291.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
pflB; pyruvate formate-lyase (C-terminus)
L3_082_000G1_scaffold_133_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24611..25363
DNA (753bp) protein (251aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CSX1_9CLOT
L3_082_000G1_scaffold_133_25
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25471..26337)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=S2Y707_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60268.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
xylose isomerase
L3_082_000G1_scaffold_133_26
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26353..27354)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RSK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75980.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
lipopolysaccharide biosynthesis protein
L3_082_000G1_scaffold_133_27
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27432..28625)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88148.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
oxidoreductase
L3_082_000G1_scaffold_133_28
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28662..29558)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88149.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
sugar phosphate isomerase
L3_082_000G1_scaffold_133_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29741..30448)
DNA (708bp) protein (236aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AH00_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFC98916.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
two-component system, response regulator YesN
L3_082_000G1_scaffold_133_30
unknown

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comp(30517..30972)
DNA (456bp) protein (152aa)

This feature has no annotations

Displaying items 1-30 of 95 in total

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