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L3_082_000G1_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_208_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129..1049
DNA (921bp) protein (307aa)
FtsK/SpoIIIE family protein n=1 Tax=Clostridium difficile CD69 RepID=T3AAX2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77102.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L3_082_000G1_scaffold_208_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1057..1461
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T3AD23_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77101.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_082_000G1_scaffold_208_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1780..2892
DNA (1113bp) protein (371aa)
Replication initiation factor family protein n=1 Tax=Clostridium difficile CD69 RepID=T3A9L8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77100.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
conjugative transposon replication initiation factor
L3_082_000G1_scaffold_208_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2908..3048
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T3AD97_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77099.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
conjugative transposon protein
L3_082_000G1_scaffold_208_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3045..3266
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis ATCC 35038 RepID=R3FVG2_ENTFL
Conjugative transposon protein {ECO:0000313|EMBL:ENZ09998.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
putative conjugative transposon proteinTn916-like, CTn7-Orf25
L3_082_000G1_scaffold_208_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3458..3832
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y250_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58311.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_082_000G1_scaffold_208_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3995..4231
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis ATCC 35038 RepID=R3DJN6_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EGX77096.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_082_000G1_scaffold_208_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4206..4703
DNA (498bp) protein (166aa)
Antirestriction family protein n=1 Tax=Clostridium difficile CD69 RepID=T3AD16_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77095.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
conjugative transposon protein
L3_082_000G1_scaffold_208_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4721..5224
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis ATCC 35038 RepID=R3G7X1_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EGX77094.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
conjugative transposon protein
L3_082_000G1_scaffold_208_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5331..5720
DNA (390bp) protein (130aa)
Conjugative transposon membrane protein n=1 Tax=Enterococcus faecalis ATCC 35038 RepID=R3FV61_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EGX77093.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
conjugative transposon membrane protein
L3_082_000G1_scaffold_208_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5707..7767
DNA (2061bp) protein (687aa)
AAA-like domain protein n=2 Tax=Clostridium difficile RepID=T4NEJ8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77092.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_082_000G1_scaffold_208_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7758..8150
DNA (393bp) protein (131aa)
AAA-like domain protein n=2 Tax=Clostridium difficile RepID=T4NEJ8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77092.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_082_000G1_scaffold_208_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8150..10282
DNA (2133bp) protein (711aa)
Putative membrane protein n=1 Tax=Clostridium difficile P29 RepID=T4NKK1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77091.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_082_000G1_scaffold_208_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10279..11286
DNA (1008bp) protein (336aa)
Lysozyme-like family protein n=1 Tax=Clostridium difficile P29 RepID=T4NJ65_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77090.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
cell wall hydrolase
L3_082_000G1_scaffold_208_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11302..12195
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77089.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
conjugative transposon protein
L3_082_000G1_scaffold_208_16
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12298..12888
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKM0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49710.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
transcriptional regulator TetR family
L3_082_000G1_scaffold_208_17
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12885..13667
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BVX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58384.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_082_000G1_scaffold_208_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13661..13885
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P38 RepID=T4Q0N0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ERK52628.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
conjugative transposon protein
L3_082_000G1_scaffold_208_19
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14042..14479
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77084.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA gyrase inhibitor
L3_082_000G1_scaffold_208_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14789..15151)
DNA (363bp) protein (121aa)
Helix-turn-helix n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPY4_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL42869.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_000G1_scaffold_208_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15671..16090
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77082.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_082_000G1_scaffold_208_22
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16087..16320
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77081.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_082_000G1_scaffold_208_23
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16709..16915
DNA (207bp) protein (69aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Enterococcus faecalis ATCC 35038 RepID=R3DJQ7_ENTFL
Excisionase transposon {ECO:0000313|EMBL:EGX74161.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
xis; Excisionase Tn916-like, CTn1-Orf2
L3_082_000G1_scaffold_208_24
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16995..18191
DNA (1197bp) protein (399aa)
Integrase n=1 Tax=Enterococcus faecalis ATCC 35038 RepID=R3DJC2_ENTFL
Site-specific recombinase XerD {ECO:0000313|EMBL:KFI83791.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Site-specific recombinase XerD
L3_082_000G1_scaffold_208_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18447..19439
DNA (993bp) protein (331aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B6FQ86_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA81782.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC family transcriptional regulator
L3_082_000G1_scaffold_208_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19493..19957)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NHZ8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35907.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_082_000G1_scaffold_208_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19966..20793)
DNA (828bp) protein (276aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Dorea sp. CAG:317 RepID=R6XPL3_9FIRM
L3_082_000G1_scaffold_208_28
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20962..21939)
DNA (978bp) protein (326aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5X5_9CLOT
L3_082_000G1_scaffold_208_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22004..25480)
DNA (3477bp) protein (1159aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG52_9FIRM
L3_082_000G1_scaffold_208_30
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25614..25847)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0B850_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG90587.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
Displaying items 1-30 of 90 in total

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