ggKbase home page

L3_082_000G1_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_289_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(141..1007)
DNA (867bp) protein (289aa)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EDS19448.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EDS19448.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=4 Tax=Erysipelotrichaceae RepID=B0N1B8_9FIRM
L3_082_000G1_scaffold_289_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1452..2636)
DNA (1185bp) protein (395aa)
Aminotransferase, class I/II n=4 Tax=Erysipelotrichaceae RepID=B0N1E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45923.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hemolysin
L3_082_000G1_scaffold_289_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2664..3404)
DNA (741bp) protein (247aa)
RNA methyltransferase, TrmH family n=5 Tax=Erysipelotrichaceae RepID=B0N1E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94027.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
tRNA/rRNA methyltransferase SpoU
L3_082_000G1_scaffold_289_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3406..3666)
DNA (261bp) protein (87aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32066.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_082_000G1_scaffold_289_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3735..4295)
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RH74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32065.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
N-acetyltransferase GCN5
L3_082_000G1_scaffold_289_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4374..5000
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QWY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94024.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
L3_082_000G1_scaffold_289_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5105..6169)
DNA (1065bp) protein (355aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N1C0_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDS19455.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
metallophosphoesterase
L3_082_000G1_scaffold_289_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6336..7364)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=C3RH71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94022.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
metallophosphoesterase
L3_082_000G1_scaffold_289_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7452..8267
DNA (816bp) protein (272aa)
Ribosomal RNA large subunit methyltransferase A n=2 Tax=Erysipelotrichaceae RepID=B0N1C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94021.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
rRNA (guanine-N(1)-)-methyltransferase
L3_082_000G1_scaffold_289_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8264..8488)
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=G9QWY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94020.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_082_000G1_scaffold_289_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8668..9258)
DNA (591bp) protein (197aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19459.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_082_000G1_scaffold_289_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9605..9727
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N1C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19460.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_082_000G1_scaffold_289_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9970..10707)
DNA (738bp) protein (246aa)
Acyl-ACP thioesterase n=4 Tax=Erysipelotrichaceae RepID=B0N1C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32059.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
acyl-ACP thioesterase
L3_082_000G1_scaffold_289_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10800..11990
DNA (1191bp) protein (397aa)
Bacterial capsule synthesis protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N1C7_9FIRM
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EDS19462.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L3_082_000G1_scaffold_289_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11995..12861
DNA (867bp) protein (289aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N1C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45935.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
yodJ; putative carboxypeptidase YodJ
L3_082_000G1_scaffold_289_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12993..13484
DNA (492bp) protein (164aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32056.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_082_000G1_scaffold_289_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13521..14270)
DNA (750bp) protein (250aa)
ABC transporter, ATP-binding protein n=3 Tax=Erysipelotrichaceae RepID=B0N1D0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS19465.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_082_000G1_scaffold_289_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14258..15577)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N1D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19466.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_082_000G1_scaffold_289_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15717..17246)
DNA (1530bp) protein (510aa)
Arylsulfatase n=3 Tax=Erysipelotrichaceae RepID=B0N1D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32053.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_082_000G1_scaffold_289_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17415..19616)
DNA (2202bp) protein (734aa)
Glycosyl hydrolase family 3 C-terminal domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N1D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94011.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glycoside hydrolase
L3_082_000G1_scaffold_289_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19634..20401)
DNA (768bp) protein (256aa)
SIS domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N1D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32051.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
SIS domain protein
L3_082_000G1_scaffold_289_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20436..23096)
DNA (2661bp) protein (887aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RH57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32050.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glycoside hydrolase family protein
L3_082_000G1_scaffold_289_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23074..24462)
DNA (1389bp) protein (463aa)
celB; PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=4 Tax=Erysipelotrichaceae RepID=B0N1D6_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_082_000G1_scaffold_289_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24561..25826)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N1D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19472.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_082_000G1_scaffold_289_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25994..26185)
DNA (192bp) protein (64aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32047.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_082_000G1_scaffold_289_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26175..27023)
DNA (849bp) protein (283aa)
5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=3 Tax=Erysipelotrichaceae RepID=B0N1D9_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_082_000G1_scaffold_289_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27085..28065)
DNA (981bp) protein (327aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
tRNA-dihydrouridine synthase n=4 Tax=Erysipelotrichaceae RepID=B0N1E0_9FIRM
hypothetical protein
L3_082_000G1_scaffold_289_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28275..28739)
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N1H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32044.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_082_000G1_scaffold_289_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28873..29742)
DNA (870bp) protein (290aa)
33 kDa chaperonin n=5 Tax=Erysipelotrichaceae RepID=B0N1H8_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
heat shock protein Hsp33
L3_082_000G1_scaffold_289_30
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29882..31846)
DNA (1965bp) protein (655aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ATP-dependent zinc metalloprotease FtsH n=3 Tax=Erysipelotrichaceae RepID=B0N1H9_9FIRM
ftsH; ATP-dependent metalloprotease FtsH
Displaying items 1-30 of 76 in total

View Taxonomy