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L3_082_000G1_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_290_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28..1905
DNA (1878bp) protein (626aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.-)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit n=4 Tax=Bacteroides RepID=D6CYF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN04671.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_082_000G1_scaffold_290_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1902..2360
DNA (459bp) protein (153aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=4 Tax=Bacteroides ovatus RepID=A7LXS6_BACOV
L3_082_000G1_scaffold_290_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2398..3975
DNA (1578bp) protein (526aa)
C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A (EC:3.4.21.102)
C-terminal processing peptidase n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TQQ3_BACOV
C-terminal processing peptidase {ECO:0000313|EMBL:EIY57427.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_000G1_scaffold_290_4
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4131..6359)
DNA (2229bp) protein (743aa)
Beta-glucosidase (EC:3.2.1.21)
Thermostable beta-glucosidase B n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JXT8_9BACE
Thermostable beta-glucosidase B {ECO:0000313|EMBL:EFI39287.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_000G1_scaffold_290_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6382..8910)
DNA (2529bp) protein (843aa)
beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, sugar binding domain protein n=2 Tax=Bacteroides ovatus RepID=A7LXS9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY57425.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_000G1_scaffold_290_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8957..11815)
DNA (2859bp) protein (953aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9IF89_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY71909.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
glycoside hydrolase family protein
L3_082_000G1_scaffold_290_7
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11965..15984)
DNA (4020bp) protein (1340aa)
Putative two-component system sensor histidine kinase/response n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JXU1_9BACE
Putative two-component system sensor histidine kinase/response {ECO:0000313|EMBL:EFI39290.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
histidine kinase
L3_082_000G1_scaffold_290_8
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16138..16383)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:709 RepID=R6DZ14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA92800.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
susB; alpha-glucosidase
L3_082_000G1_scaffold_290_9

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comp(16682..17611)
DNA (930bp) protein (310aa)
Group II intron-encoding maturase n=1 Tax=human gut metagenome RepID=K1UJR2_9ZZZZ
Group II intron-encoding maturase {ECO:0000313|EMBL:EKC78400.1}; Reverse transcriptase and maturase {ECO:0000313|EMBL:EKC46289.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
reverse transcriptase
L3_082_000G1_scaffold_290_10
Prevotella sp. P5-119, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17920..18078)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9HS41_BACOV
Contig31, whole genome shotgun sequence {ECO:0000313|EMBL:KIP64186.1}; TaxID=1602171 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. P5-119.;"
reverse transcriptase
L3_082_000G1_scaffold_290_11
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18538..19395)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KA47_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB70345.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
AraC family transcriptional regulator
L3_082_000G1_scaffold_290_12
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19477..20901
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:732 RepID=R6XA29_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD20463.1}; TaxID=1262934 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
hypothetical protein
L3_082_000G1_scaffold_290_13
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21198..22103)
DNA (906bp) protein (302aa)
Transposase, IS4 family n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L3M9_9BACE
Transposase, IS4 family {ECO:0000313|EMBL:EEX43104.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
transposase
L3_082_000G1_scaffold_290_14
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22796..24262)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=D2EY84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE04250.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_082_000G1_scaffold_290_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24289..25893)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TRM4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY71913.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
RagB/SusD domain-containing protein
L3_082_000G1_scaffold_290_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25924..29106)
DNA (3183bp) protein (1061aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L5S4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN04681.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
TonB-dependent receptor plug
L3_082_000G1_scaffold_290_17
unknown

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comp(29133..29942)
DNA (810bp) protein (270aa)

This feature has no annotations

L3_082_000G1_scaffold_290_18
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29982..32081)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VC14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87890.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
glycoside hydrolase family protein
L3_082_000G1_scaffold_290_19
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32088..33533)
DNA (1446bp) protein (482aa)
Glycosyl hydrolase family 43 n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FIU8_9BACE
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDB09334.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
glycoside hydrolase
L3_082_000G1_scaffold_290_20

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comp(33534..34610)
DNA (1077bp) protein (359aa)
cellulase (EC:3.2.1.4)
Cellulase n=1 Tax=uncultured microorganism RepID=B1PLI7_9ZZZZ
Cellulase {ECO:0000313|EMBL:ACA61144.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
L3_082_000G1_scaffold_290_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34622..36124)
DNA (1503bp) protein (501aa)
Carbohydrate binding module n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V7N8_9BACE
Carbohydrate binding module {ECO:0000313|EMBL:EFV27178.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
carbohydrate-binding family 6
L3_082_000G1_scaffold_290_22
Prevotella buccae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36164..37594)
DNA (1431bp) protein (477aa)
Cellulase (Glycosyl hydrolase family 5) {ECO:0000313|EMBL:EFU29964.1}; EC=3.2.1.4 {ECO:0000313|EMBL:EFU29964.1};; TaxID=873513 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae ATCC 33574.;"
endo-1,4-beta-xylanase/cellulase (EC:3.2.1.8 3.2.1.4)
Cellulase (Glycosyl hydrolase family 5) n=1 Tax=Prevotella buccae ATCC 33574 RepID=E6K910_9BACT
L3_082_000G1_scaffold_290_23
unknown

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comp(37725..37874)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_082_000G1_scaffold_290_24
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38036..39616)
DNA (1581bp) protein (527aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CBB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31968.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_082_000G1_scaffold_290_25
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39855..42215
DNA (2361bp) protein (787aa)
Beta-glucosidase (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CBB7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31966.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_082_000G1_scaffold_290_26
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42396..42740)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CBB6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31965.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
L3_082_000G1_scaffold_290_27
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43506..44168
DNA (663bp) protein (221aa)
Putative DNA-binding protein n=1 Tax=Bacteroides sp. D2 RepID=E5CBB5_9BACE
Putative DNA-binding protein {ECO:0000313|EMBL:EFS31964.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
DNA-binding protein, histone-like, putative
L3_082_000G1_scaffold_290_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44273..46615)
DNA (2343bp) protein (781aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L5T1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN04688.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_082_000G1_scaffold_290_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46710..48677)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TRN3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY71923.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_082_000G1_scaffold_290_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48697..49965)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9IFA1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:KDS14710.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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