ggKbase home page

L3_082_000G1_scaffold_303

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_303_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(258..2609)
DNA (2352bp) protein (784aa)
Family 31 glycosyl hydrolase, alpha-glucosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6Y6_9CLOT
Family 31 glycosyl hydrolase, alpha-glucosidase {ECO:0000313|EMBL:EKQ50954.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
alpha-xylosidase YicI
L3_082_000G1_scaffold_303_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2735..3562)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Clostridium beijerinckii RepID=UPI00030A29B9
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EKQ50955.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
binding-protein-dependent transport system inner membrane protein
L3_082_000G1_scaffold_303_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3562..4440)
DNA (879bp) protein (293aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4L7_9CLOT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHJ01592.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
binding-protein-dependent transport system inner membrane protein
L3_082_000G1_scaffold_303_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4632..5951)
DNA (1320bp) protein (440aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4L8_9CLOT
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EKQ50957.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L3_082_000G1_scaffold_303_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6115..7986
DNA (1872bp) protein (624aa)
HAMP domain-containing protein,histidine kinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXJ5_9CLOT
HAMP domain-containing protein,histidine kinase {ECO:0000313|EMBL:EKQ50958.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative sensor with HAMP domain containing protein
L3_082_000G1_scaffold_303_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7967..8740
DNA (774bp) protein (258aa)
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6Y9_9CLOT
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ50959.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
two component transcriptional regulator, AraC family
L3_082_000G1_scaffold_303_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8938..10275)
DNA (1338bp) protein (446aa)
CBS/transporter domain protein n=2 Tax=Clostridium botulinum B RepID=B2TR44_CLOBB
CBS/transporter domain protein
CBS/transporter domain protein {ECO:0000313|EMBL:ACD21727.1}; Putative modulator of ions transport {ECO:0000313|EMBL:CDH92329.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_082_000G1_scaffold_303_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10706..12082)
DNA (1377bp) protein (459aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
glmM; phosphoglucosamine mutase GlmM (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Clostridium butyricum RepID=B1QZX1_CLOBU
L3_082_000G1_scaffold_303_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12248..12553)
DNA (306bp) protein (102aa)
TrpR homolog, YerC/YecD family n=3 Tax=Clostridium butyricum RepID=C4IEZ0_CLOBU
TrpR homolog, YerC/YecD family {ECO:0000313|EMBL:EEP55581.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
TrpR like protein, YerC/YecD
L3_082_000G1_scaffold_303_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12821..14308
DNA (1488bp) protein (496aa)
Membrane-bound O-acyltransferase family protein n=2 Tax=Clostridium botulinum A RepID=A5I6C7_CLOBH
Putative alginate O-acetyltransferase AlgI {ECO:0000313|EMBL:BAQ14715.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
alginate O-acetyltransferase AlgI
L3_082_000G1_scaffold_303_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14323..15282
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1IM48_CLOBK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ14716.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_082_000G1_scaffold_303_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15476..16501)
DNA (1026bp) protein (342aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=4 Tax=Clostridium butyricum RepID=B1QZW2_CLOBU
L3_082_000G1_scaffold_303_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16818..17651)
DNA (834bp) protein (278aa)
HTH DNA-binding protein n=3 Tax=Clostridium butyricum RepID=B1QZW9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97387.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
HTH DNA-binding protein
L3_082_000G1_scaffold_303_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17855..18373)
DNA (519bp) protein (173aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
buk1; butyrate kinase Buk (EC:2.7.2.7)
Probable butyrate kinase n=4 Tax=Clostridium butyricum RepID=B1QZW1_CLOBU
L3_082_000G1_scaffold_303_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18563..18922)
DNA (360bp) protein (120aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
buk1; butyrate kinase Buk (EC:2.7.2.7)
Probable butyrate kinase n=4 Tax=Clostridium butyricum RepID=B1QZW1_CLOBU
L3_082_000G1_scaffold_303_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19020..19928)
DNA (909bp) protein (303aa)
Phosphotransbutyrylase {ECO:0000313|EMBL:KJZ87175.1}; EC=2.3.1.19 {ECO:0000313|EMBL:KJZ87175.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ptb; phosphate butyryltransferase Ptb (EC:2.3.1.19)
Phosphate butyryltransferase n=2 Tax=Clostridium butyricum RepID=M8K9M7_CLOBU
L3_082_000G1_scaffold_303_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20261..21583)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003754432
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:EKY28742.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L3_082_000G1_scaffold_303_18
Clostridium sp. IBUN62F, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21877..22731)
DNA (855bp) protein (285aa)
Tagatose 1,6-bisphosphate aldolase {ECO:0000313|EMBL:KJZ92362.1}; EC=4.1.2.40 {ECO:0000313|EMBL:KJZ92362.1};; TaxID=1523157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN62F.;"
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
Class II aldolase, tagatose bisphosphate family n=2 Tax=Clostridium butyricum RepID=B1QXV0_CLOBU
L3_082_000G1_scaffold_303_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22776..23207)
DNA (432bp) protein (144aa)
Pts system mannose-specific eiiab component n=3 Tax=Clostridium butyricum RepID=B1QXU9_CLOBU
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENZ30325.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system fructose IIA component
L3_082_000G1_scaffold_303_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23226..24386)
DNA (1161bp) protein (387aa)
Putative tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30324.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AgaS protein
L3_082_000G1_scaffold_303_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24484..25248)
DNA (765bp) protein (255aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridium butyricum RepID=M8K263_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30323.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntR family transcriptional regulator
L3_082_000G1_scaffold_303_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25380..26231)
DNA (852bp) protein (284aa)
N-acetylgalactosamine permease iid component n=2 Tax=Clostridium butyricum RepID=B1QXU6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96287.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_082_000G1_scaffold_303_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26215..26985)
DNA (771bp) protein (257aa)
N-acetylgalactosamine permease iic component 1 n=2 Tax=Clostridium butyricum RepID=B1QXU5_CLOBU
PTS system sorbose-specific IIC component {ECO:0000313|EMBL:EEP55384.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system sorbose-specific transporter subunit IIC
L3_082_000G1_scaffold_303_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27015..27491)
DNA (477bp) protein (159aa)
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Clostridium butyricum RepID=M8J6M0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96291.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_082_000G1_scaffold_303_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27807..28946
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE8_CLOBU
L3_082_000G1_scaffold_303_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28982..29938)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1G5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30318.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
BadF/BadG/BcrA/BcrD family ATPase
L3_082_000G1_scaffold_303_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29996..31342)
DNA (1347bp) protein (449aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8JFI5_CLOBU
Sugar ABC transporter sugar-binding protein {ECO:0000313|EMBL:KJZ88010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter
L3_082_000G1_scaffold_303_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31429..31584)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRU0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88021.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_082_000G1_scaffold_303_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31610..33769)
DNA (2160bp) protein (720aa)
Lacto-N-biose phosphorylase {ECO:0000313|EMBL:KJZ88009.1}; EC=2.4.1.211 {ECO:0000313|EMBL:KJZ88009.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGU8_CLOBU
hypothetical protein
L3_082_000G1_scaffold_303_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33781..34668)
DNA (888bp) protein (296aa)
Permease protein n=4 Tax=Clostridium butyricum RepID=B1QXT9_CLOBU
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:KJZ88020.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
binding-protein-dependent transport system inner membrane protein
Displaying items 1-30 of 90 in total

View Taxonomy