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L3_082_000G1_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_323_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68..1987
DNA (1920bp) protein (640aa)
Transketolase {ECO:0000313|EMBL:KFI95154.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KFI95154.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Transketolase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZC2_9BIFI
transketolase
L3_082_000G1_scaffold_323_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2077..3180
DNA (1104bp) protein (368aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Transaldolase n=5 Tax=Bifidobacterium RepID=A1A1M8_BIFAA
transaldolase
L3_082_000G1_scaffold_323_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3351..4883)
DNA (1533bp) protein (511aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDN82871.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDN82871.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Aminotransferase, class I/II n=3 Tax=Bifidobacterium RepID=A7A5N3_BIFAD
putative aminotransferase
L3_082_000G1_scaffold_323_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5037..5885)
DNA (849bp) protein (283aa)
HAD hydrolase, family IIB n=2 Tax=Bifidobacterium RepID=A7A5N2_BIFAD
hypothetical protein
HAD family hydrolase {ECO:0000313|EMBL:KIM01464.1}; Haloacid dehalogenase {ECO:0000313|EMBL:AII76304.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05935.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_000G1_scaffold_323_5
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5973..6221)
DNA (249bp) protein (83aa)
Protein-export membrane protein SecG n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZK1_9BIFI
secG; preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KFI98422.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_000G1_scaffold_323_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6320..7114)
DNA (795bp) protein (265aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Triosephosphate isomerase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=TPIS_BIFAA
tpiA; triosephosphate isomerase
L3_082_000G1_scaffold_323_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7240..8445)
DNA (1206bp) protein (402aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Phosphoglycerate kinase n=2 Tax=Bifidobacterium adolescentis RepID=PGK_BIFAA
L3_082_000G1_scaffold_323_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8577..9527)
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=3 Tax=Bifidobacterium RepID=WHIA_BIFAA
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_000G1_scaffold_323_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9682..10614)
DNA (933bp) protein (311aa)
UPF0042 nucleotide-binding protein BAD_0837 n=3 Tax=Bifidobacterium RepID=Y837_BIFAA
hypothetical protein
Nucleotide-binding protein BIFADO_01146 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_082_000G1_scaffold_323_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10614..11552)
DNA (939bp) protein (313aa)
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GL72_9BIFI
putative shikimate 5-dehydrogenase
Putative shikimate 5-dehydrogenase {ECO:0000313|EMBL:AJE05941.1}; Shikimate 5-dehydrogenase {ECO:0000313|EMBL:AII76310.1}; Shikimate dehydrogenase {ECO:0000313|EMBL:KIM01459.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_000G1_scaffold_323_11
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11618..13930)
DNA (2313bp) protein (771aa)
UvrABC system protein C n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GLR6_9BIFI
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
excinuclease ABC subunit C
L3_082_000G1_scaffold_323_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13957..16944)
DNA (2988bp) protein (996aa)
UvrABC system protein A n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5M3_BIFAD
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
excinuclease ABC subunit A
L3_082_000G1_scaffold_323_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17020..18255)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5M2_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76313.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_000G1_scaffold_323_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18257..21715)
DNA (3459bp) protein (1153aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5M1_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82859.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_082_000G1_scaffold_323_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21715..22554)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1P1_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76315.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_000G1_scaffold_323_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22557..24053)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5L9_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82857.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_082_000G1_scaffold_323_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24182..24577)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTL2_9BIFI
Polysaccharide synthesis protein GtrA {ECO:0000313|EMBL:KIM00952.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
membrane protein
L3_082_000G1_scaffold_323_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24744..24911)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTL3_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76318.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_000G1_scaffold_323_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25078..25443
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A1P5_BIFAA
hypothetical protein
Cupin domain protein {ECO:0000313|EMBL:KFI98408.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_000G1_scaffold_323_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25732..26742)
DNA (1011bp) protein (337aa)
VanZ-like protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5L4_BIFAD
VanZ-like protein {ECO:0000313|EMBL:EDN82852.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_082_000G1_scaffold_323_21
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27128..27382)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H055_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI98405.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_000G1_scaffold_323_22
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27642..28130
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZM6_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEB21814.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L3_082_000G1_scaffold_323_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28417..29022)
DNA (606bp) protein (202aa)
Isochorismatase family protein {ECO:0000313|EMBL:EDN82846.1}; EC=3.-.-.- {ECO:0000313|EMBL:EDN82846.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
pncA; Pyrazinamidase/Nicotinamidase (EC:3.5.1.19)
Isochorismatase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5K8_BIFAD
L3_082_000G1_scaffold_323_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29266..29982
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5K7_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82845.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ABC transporter2C ATP-binding protein
L3_082_000G1_scaffold_323_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30065..31666
DNA (1602bp) protein (534aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium RepID=A7A5K6_BIFAD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN82844.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ATP binding protein of ABC transporter
L3_082_000G1_scaffold_323_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31767..32792)
DNA (1026bp) protein (342aa)
Cation transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1Q0_BIFAA
cation transporter
Cation transporter {ECO:0000313|EMBL:AJE05960.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_000G1_scaffold_323_27
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32937..34058
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1Q1_BIFAA
Methionine synthase vitamin-B12 independent protein {ECO:0000313|EMBL:KFI98401.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
yxjG_1; hypothetical protein
L3_082_000G1_scaffold_323_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34156..34959)
DNA (804bp) protein (268aa)
Putative carboxymuconolactone decarboxylase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1Q2_BIFAA
putative carboxymuconolactone decarboxylase
Putative carboxymuconolactone decarboxylase {ECO:0000313|EMBL:BAF39635.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_082_000G1_scaffold_323_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35011..35484)
DNA (474bp) protein (158aa)
Transcriptional regulator, MerR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5K2_BIFAD
MerR family transcriptional regulator
Regulatory protein {ECO:0000313|EMBL:KFI98399.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_000G1_scaffold_323_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35696..36646)
DNA (951bp) protein (317aa)
Linear amide C-N hydrolase, choloylglycine hydrolase family protein n=2 Tax=Bifidobacterium adolescentis RepID=A7A5K1_BIFAD
choloylglycine hydrolase
Choloylglycine hydrolase {ECO:0000313|EMBL:AJE05964.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 69 in total

View Taxonomy