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L3_082_000G1_scaffold_369

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_369_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75..899)
DNA (825bp) protein (275aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Clostridiales RepID=B0NA59_CLOSV
Dihydrodipicolinate reductase
L3_082_000G1_scaffold_369_2
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1720..2028)
DNA (309bp) protein (103aa)
Thioredoxin n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJG6_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
thioredoxin
L3_082_000G1_scaffold_369_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2043..2825)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9ND39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81220.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_082_000G1_scaffold_369_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2837..3883)
DNA (1047bp) protein (349aa)
Hydrolase, NUDIX family n=2 Tax=Clostridiales RepID=B0NA72_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39140.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Isopentenyldiphosphate isomerase
L3_082_000G1_scaffold_369_5
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4055..4960
DNA (906bp) protein (302aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
RluA family pseudouridine synthase n=1 Tax=Dorea sp. 5-2 RepID=R9NDC3_9FIRM
L3_082_000G1_scaffold_369_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5013..5843)
DNA (831bp) protein (277aa)
DNA-damage-inducible protein D n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LMH0_9FIRM
DNA-damage-inducible protein D {ECO:0000313|EMBL:EET58167.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_082_000G1_scaffold_369_7
unknown

Not on your lists

comp(5904..6239)
DNA (336bp) protein (112aa)

This feature has no annotations

L3_082_000G1_scaffold_369_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6251..6823)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LKC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET58828.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_082_000G1_scaffold_369_9
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6886..8613)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NF46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81566.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L3_082_000G1_scaffold_369_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8679..9695)
DNA (1017bp) protein (339aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS08568.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS08568.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridiales RepID=B0NA75_CLOSV
Glycosyltransferases involved in cell wall biogenesis
L3_082_000G1_scaffold_369_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9969..11693)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA83_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08576.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_082_000G1_scaffold_369_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11678..13189)
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39150.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_082_000G1_scaffold_369_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13387..14634)
DNA (1248bp) protein (416aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=2 Tax=Clostridiales RepID=B0NA86_CLOSV
L3_082_000G1_scaffold_369_14
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14741..14914)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4V1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72719.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L3_082_000G1_scaffold_369_15
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14920..16419)
DNA (1500bp) protein (500aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
Glycerol kinase n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FN01_9ACTN
glycerol kinase
L3_082_000G1_scaffold_369_16
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16434..17342)
DNA (909bp) protein (303aa)
Transcriptional regulator, AraC family n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BFD5_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCX75621.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
L3_082_000G1_scaffold_369_17
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17677..19080)
DNA (1404bp) protein (468aa)
Amino acid carrier protein n=2 Tax=Clostridium RepID=D4C7Q9_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:EFE14597.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
amino acid carrier protein
L3_082_000G1_scaffold_369_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19311..19871
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5D2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26444.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_082_000G1_scaffold_369_19
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19917..20384)
DNA (468bp) protein (156aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JIF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33601.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L3_082_000G1_scaffold_369_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20567..21526)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BXG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19445.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_082_000G1_scaffold_369_21
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21598..21765)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Streptococcus sanguinis SK1087 RepID=F3SGR5_STRSA
Uncharacterized protein {ECO:0000313|EMBL:EGG40726.1}; TaxID=888824 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis SK1087.;"
L3_082_000G1_scaffold_369_22
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21971..23236)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKX6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49578.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Site-specific recombinase XerD
L3_082_000G1_scaffold_369_23
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23236..23448)
DNA (213bp) protein (71aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKX5_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49588.1}; Flags: Fragment;; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Excisionase from transposon Tn916.
L3_082_000G1_scaffold_369_24
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23429..23569)
DNA (141bp) protein (47aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKX4_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49587.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L3_082_000G1_scaffold_369_25
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23680..24303
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKQ1_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49608.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Transcriptional regulator
L3_082_000G1_scaffold_369_26
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24390..25307
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKQ0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49607.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
ABC-type multidrug transport system, ATPase and permease components
L3_082_000G1_scaffold_369_27
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25304..26074
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKQ0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49607.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
ABC-type multidrug transport system, ATPase and permease components
L3_082_000G1_scaffold_369_28
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26238..27557)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73916.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_082_000G1_scaffold_369_29
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27863..28522)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z6B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59614.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_082_000G1_scaffold_369_30
unknown

Not on your lists

comp(28515..28604)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying items 1-30 of 70 in total

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