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L3_082_000G1_scaffold_504

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_504_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(45..194)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22529.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_082_000G1_scaffold_504_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(555..1331)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32019.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
transposase ISL3 family
L3_082_000G1_scaffold_504_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1372..2217)
DNA (846bp) protein (282aa)
Transposase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRT2_9FIRM
Transposase {ECO:0000313|EMBL:EDY32020.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
transposase, IS204/IS1001/IS1096/IS1165
L3_082_000G1_scaffold_504_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2445..3572
DNA (1128bp) protein (376aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CBL26456.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CBL26456.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Nucleotide sugar dehydrogenase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5E4_9FIRM
L3_082_000G1_scaffold_504_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3521..4420
DNA (900bp) protein (300aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:CBL02952.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CBL02952.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Phosphomannomutase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5U3_9FIRM
L3_082_000G1_scaffold_504_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5019..5402)
DNA (384bp) protein (128aa)
Glyoxalase family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CPH6_9CLOT
Glyoxalase family protein {ECO:0000313|EMBL:ERI69191.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Lactoylglutathione lyase and related lyases
L3_082_000G1_scaffold_504_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5506..5838)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69192.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_082_000G1_scaffold_504_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5891..7960)
DNA (2070bp) protein (690aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecium E4453 RepID=G9SQA6_ENTFC
P-loop domain protein, KAP family {ECO:0000313|EMBL:ERK52527.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
KAP family P-loop domain.
L3_082_000G1_scaffold_504_9
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8109..8720)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecium E4453 RepID=G9SQA7_ENTFC
VanZ-like protein {ECO:0000313|EMBL:EEG90678.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
VanZ-like protein
L3_082_000G1_scaffold_504_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8727..9629)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69193.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
dTDP-glucose pyrophosphorylase
L3_082_000G1_scaffold_504_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9854..10831)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74492.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
diguanylate cyclase (GGDEF) domain
L3_082_000G1_scaffold_504_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11017..11625)
DNA (609bp) protein (203aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP2_9FIRM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EES77679.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase
L3_082_000G1_scaffold_504_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11641..12555)
DNA (915bp) protein (305aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP3_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EES77680.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_082_000G1_scaffold_504_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12577..13596)
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP4_9FIRM
L3_082_000G1_scaffold_504_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13638..14534)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP6_9FIRM
L3_082_000G1_scaffold_504_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14642..15073)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZGC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA33271.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
acetyltransferase
L3_082_000G1_scaffold_504_17
unknown

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comp(15040..15216)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_082_000G1_scaffold_504_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15239..16300)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FFU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04722.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
NAD-dependent epimerase/dehydratase
L3_082_000G1_scaffold_504_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16304..18043)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HX32_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY97106.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
thiamine pyrophosphate binding domain-containing protein
L3_082_000G1_scaffold_504_20
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18216..19325)
DNA (1110bp) protein (370aa)
frhB; F420 reducing hydrogenase subunit beta (EC:1.12.98.1)
F420 reducing hydrogenase subunit beta {ECO:0000313|EMBL:AFA48124.1}; EC=1.12.98.1 {ECO:0000313|EMBL:AFA48124.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
F420 reducing hydrogenase subunit beta n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEM1_ACEWD
L3_082_000G1_scaffold_504_21
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19347..20747)
DNA (1401bp) protein (467aa)
Polysaccharide biosynthesis protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEM0_ACEWD
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AFA48123.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_082_000G1_scaffold_504_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20766..21908)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77686.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
polysaccharide pyruvyl transferase
L3_082_000G1_scaffold_504_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21905..23164)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77687.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_082_000G1_scaffold_504_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23180..24346)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:BAP83059.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L3_082_000G1_scaffold_504_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24388..25317)
DNA (930bp) protein (310aa)
Capsular polysaccharide synthesis protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIS5_9FIRM
Capsular polysaccharide synthesis protein {ECO:0000313|EMBL:ERI72400.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
capsular biosynthesis protein
L3_082_000G1_scaffold_504_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25368..26222)
DNA (855bp) protein (285aa)
Capsular polysaccharide synthesis protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIS5_9FIRM
Capsular polysaccharide synthesis protein {ECO:0000313|EMBL:ERI72400.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
capsular polysaccharide synthesis protein
L3_082_000G1_scaffold_504_27
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26200..27426)
DNA (1227bp) protein (409aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIS6_9FIRM
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDA20102.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Glycosyltransferase
L3_082_000G1_scaffold_504_28
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27742..28866)
DNA (1125bp) protein (375aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEG90705.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG90705.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Glycosyltransferase (EC:2.4.1.57)
Glycosyltransferase, group 1 family protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B712_9FIRM
L3_082_000G1_scaffold_504_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29106..30560)
DNA (1455bp) protein (485aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44779.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_082_000G1_scaffold_504_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30635..31318)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44778.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying items 1-30 of 61 in total

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