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L3_082_000G1_scaffold_510

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_510_1
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99..383
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82314.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Plasmid recombination enzyme.
L3_082_000G1_scaffold_510_2
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

388..762
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YYV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62942.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_082_000G1_scaffold_510_3
unknown

Not on your lists

755..850
DNA (96bp) protein (32aa)

This feature has no annotations

L3_082_000G1_scaffold_510_4
Gallibacterium genomosp. 1, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

900..1088
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y0X7_9FIRM
Transposase {ECO:0000313|EMBL:KGQ35530.1}; TaxID=155515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium genomosp. 1.;"
hypothetical protein
L3_082_000G1_scaffold_510_5
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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1142..2197
DNA (1056bp) protein (352aa)
Cytosine-specific methyltransferase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MQ42_9FIRM
DNA cytosine methylase
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56723.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
L3_082_000G1_scaffold_510_6
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

2184..3566
DNA (1383bp) protein (461aa)
hypothetical protein
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56724.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
L3_082_000G1_scaffold_510_7
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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3563..4150
DNA (588bp) protein (196aa)
hypothetical protein
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56725.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
L3_082_000G1_scaffold_510_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4666..4914
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68355.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
prevent-host-death family protein
L3_082_000G1_scaffold_510_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4916..5215
DNA (300bp) protein (100aa)
Addiction module toxin, RelE/StbE family n=4 Tax=Clostridiales RepID=A7B219_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68356.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Plasmid stabilization system protein
L3_082_000G1_scaffold_510_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5347..5748
DNA (402bp) protein (134aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHS0_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCZ68357.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
GNAT family acetyltransferase
L3_082_000G1_scaffold_510_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5773..6237
DNA (465bp) protein (155aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ogt; methylated-DNA--protein-cysteine methyltransferase Ogt (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRD2_9FIRM
L3_082_000G1_scaffold_510_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6239..8035
DNA (1797bp) protein (599aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYD8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ68359.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Helix-turn-helix.
L3_082_000G1_scaffold_510_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8149..9855
DNA (1707bp) protein (569aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B223_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46773.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_082_000G1_scaffold_510_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9870..10853
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BX56_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19360.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type multidrug transport system, ATPase and permease components
L3_082_000G1_scaffold_510_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11140..12537
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68362.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type sugar transport system, periplasmic component
L3_082_000G1_scaffold_510_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12621..13511
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68363.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC transporter
L3_082_000G1_scaffold_510_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13531..14409
DNA (879bp) protein (293aa)
ABC transporter, permease protein n=4 Tax=Clostridiales RepID=A7B227_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46769.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
permease protein
L3_082_000G1_scaffold_510_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14422..14589
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68365.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_000G1_scaffold_510_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14751..15191
DNA (441bp) protein (147aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EDN78301.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EDN78301.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=4 Tax=Clostridiales RepID=A7B230_RUMGN
L3_082_000G1_scaffold_510_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15272..16066)
DNA (795bp) protein (265aa)
Cof-like hydrolase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHT1_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ68367.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
HAD-superfamily hydrolase, subfamily IIB
L3_082_000G1_scaffold_510_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16236..17582
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B233_RUMGN
L3_082_000G1_scaffold_510_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17633..18421)
DNA (789bp) protein (263aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B234_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN78306.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative Xre family DNA-binding protein
L3_082_000G1_scaffold_510_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18547..19044
DNA (498bp) protein (166aa)
Sporulation initiation factor Spo0A domain protein n=3 Tax=Lachnospiraceae RepID=A7B235_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46964.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_082_000G1_scaffold_510_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19111..19875
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BX46_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46963.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_082_000G1_scaffold_510_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19887..20354)
DNA (468bp) protein (156aa)
NADH dehydrogenase subunit E n=4 Tax=Clostridiales RepID=A7B237_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46962.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative NADH-ubiquinone oxidoreductase
L3_082_000G1_scaffold_510_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20456..21742)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68373.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Hemolysins and related proteins containing CBS domains
L3_082_000G1_scaffold_510_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21848..22834
DNA (987bp) protein (329aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=3 Tax=Lachnospiraceae RepID=A7B239_RUMGN
L3_082_000G1_scaffold_510_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22838..23716
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein RUMGNA_01616 n=3 Tax=Lachnospiraceae RepID=A7B240_RUMGN
Nucleotide-binding protein HMPREF1201_01492 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted P-loop-containing kinase
L3_082_000G1_scaffold_510_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23729..24691
DNA (963bp) protein (321aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BX42_RUMGN
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_000G1_scaffold_510_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24684..24941
DNA (258bp) protein (86aa)
Phosphocarrier, HPr family n=4 Tax=Clostridiales RepID=A7B242_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46957.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phosphotransferase System HPr (HPr) Family
Displaying items 1-30 of 164 in total

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