ggKbase home page

L3_082_000G1_scaffold_517

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_517_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

197..1441
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000317445E
Uncharacterized protein {ECO:0000313|EMBL:EES78191.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
proteinase inhibitor I4 serpin
L3_082_000G1_scaffold_517_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1481..2086)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CMC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79146.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted ATP-dependent endonuclease of the OLD family
L3_082_000G1_scaffold_517_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2717..5347
DNA (2631bp) protein (877aa)
DNA mismatch repair protein MutS n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P5_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA mismatch repair protein MutS
L3_082_000G1_scaffold_517_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5354..7405
DNA (2052bp) protein (684aa)
DNA mismatch repair protein MutL n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMH4_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA mismatch repair protein MutL
L3_082_000G1_scaffold_517_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7425..8369
DNA (945bp) protein (315aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN55_9FIRM
L3_082_000G1_scaffold_517_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8465..9739
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78185.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L3_082_000G1_scaffold_517_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9736..10926
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79156.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted flavoproteins
L3_082_000G1_scaffold_517_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10923..12518
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78183.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized FAD-dependent dehydrogenases
L3_082_000G1_scaffold_517_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12653..13372
DNA (720bp) protein (240aa)
DNA repair protein RadC n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9N9_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EES78182.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA replication and repair protein RadC
L3_082_000G1_scaffold_517_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13395..14408
DNA (1014bp) protein (338aa)
Cell shape determining protein MreB/Mrl n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN72_9FIRM
Cell shape determining protein MreB/Mrl {ECO:0000313|EMBL:CDD79162.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Actin-like ATPase involved in cell morphogenesis
L3_082_000G1_scaffold_517_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14426..15337
DNA (912bp) protein (304aa)
Cell shape-determining protein MreC n=2 Tax=Ruminococcus RepID=C6J9N7_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rod shape-determining protein MreC
L3_082_000G1_scaffold_517_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15327..15857
DNA (531bp) protein (177aa)
Rod shape-determining protein MreD n=2 Tax=Ruminococcus RepID=C6J9N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79166.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rod shape-determining protein MreD
L3_082_000G1_scaffold_517_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15842..18736
DNA (2895bp) protein (965aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9N5_9FIRM
pbpA1; penicillin-binding protein PbpA1
L3_082_000G1_scaffold_517_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18797..19585
DNA (789bp) protein (263aa)
Site-determining protein n=2 Tax=Ruminococcus RepID=C6J9N4_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
septum site-determining protein MinD
L3_082_000G1_scaffold_517_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19611..19898
DNA (288bp) protein (96aa)
Cell division topological specificity factor MinE n=2 Tax=Ruminococcus RepID=C6J9N3_9FIRM
Cell division topological specificity factor {ECO:0000256|SAAS:SAAS00085645}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cell division topological specificity factor MinE
L3_082_000G1_scaffold_517_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19892..21052
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78175.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Bacterial cell division membrane protein
L3_082_000G1_scaffold_517_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21049..22248
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78174.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
D-alanyl-D-alanine carboxypeptidase
L3_082_000G1_scaffold_517_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22464..23003
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79175.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_082_000G1_scaffold_517_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23384..23710
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79176.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_082_000G1_scaffold_517_20
unknown

Not on your lists

comp(23890..23991)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_082_000G1_scaffold_517_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24281..24550
DNA (270bp) protein (90aa)
RelB/DinJ family addiction module antitoxin n=2 Tax=Ruminococcus RepID=C6J9M6_9FIRM
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EES78169.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
addiction module antitoxin, RelB/DinJ family
L3_082_000G1_scaffold_517_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24547..24822
DNA (276bp) protein (92aa)
RelE/StbE family addiction module toxin n=2 Tax=Ruminococcus RepID=C6J9M5_9FIRM
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EES78168.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
addiction module toxin, RelE/StbE family
L3_082_000G1_scaffold_517_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24847..25131
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79180.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_082_000G1_scaffold_517_24
unknown

Not on your lists

25282..25560
DNA (279bp) protein (93aa)

This feature has no annotations

L3_082_000G1_scaffold_517_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25638..26282
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79182.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_082_000G1_scaffold_517_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26300..26815
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78165.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_082_000G1_scaffold_517_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26763..27443
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78164.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinase XerC
L3_082_000G1_scaffold_517_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27827..28246
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78619.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_082_000G1_scaffold_517_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28395..28652
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78617.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_082_000G1_scaffold_517_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28816..29898)
DNA (1083bp) protein (361aa)
Site-specific recombinase XerD n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKY1_9FIRM
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD78615.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Site-specific recombinase XerD
Displaying items 1-30 of 61 in total

View Taxonomy