ggKbase home page

L3_082_000G1_scaffold_605

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_605_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..1895
DNA (1893bp) protein (631aa)
Uncharacterized protein n=6 Tax=Bacteroides fragilis RepID=I3HNL6_BACFG
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:EYA37463.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
putative K+ transport related membrane protein
L3_082_000G1_scaffold_605_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2644..3855
DNA (1212bp) protein (404aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=E1WV25_BACF6
AhpC/TSA family protein {ECO:0000313|EMBL:EXY89421.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_000G1_scaffold_605_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3879..5045)
DNA (1167bp) protein (389aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
Nicotinate phosphoribosyltransferase n=4 Tax=Bacteroides fragilis RepID=I8X2P4_BACFG
pncB; putative nicotinate phosphoribosyltransferase
L3_082_000G1_scaffold_605_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5275..6141
DNA (867bp) protein (289aa)
AraC family transcriptional regulator n=9 Tax=Bacteroides RepID=Q64QG5_BACFR
putative AraC-family regulatory protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EXZ52377.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_082_000G1_scaffold_605_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6574..7785
DNA (1212bp) protein (404aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=K1G2F2_BACFG
putative integrase
Phage integrase family protein {ECO:0000313|EMBL:EYA37459.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L3_082_000G1_scaffold_605_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7948..8826)
DNA (879bp) protein (293aa)
AraC family transcriptional regulator n=4 Tax=Bacteroides RepID=Q64QG7_BACFR
putative AraC-family regulatory protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EXY83290.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L3_082_000G1_scaffold_605_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9124..10392
DNA (1269bp) protein (423aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9GJJ8_BACFG
Major fimbrial subunit family protein {ECO:0000313|EMBL:EXZ52374.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
hypothetical protein
L3_082_000G1_scaffold_605_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10519..11421
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8X2P0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY44347.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative lipoprotein
L3_082_000G1_scaffold_605_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11467..13233
DNA (1767bp) protein (589aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9V916_BACFG
Putative lipoprotein {ECO:0000313|EMBL:EXY83287.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L3_082_000G1_scaffold_605_10
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13260..14954
DNA (1695bp) protein (565aa)
Fibrobacter succinogene major paralogous domain protein n=4 Tax=Bacteroides RepID=D1JTY4_9BACE
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EEZ24459.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative lipoprotein
L3_082_000G1_scaffold_605_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14991..16760
DNA (1770bp) protein (590aa)
Putative lipoprotein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LA54_BACFN
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CAH09020.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_082_000G1_scaffold_605_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16773..17408
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6I9P3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY89429.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_000G1_scaffold_605_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17427..17789
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q5LA56_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH09018.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_082_000G1_scaffold_605_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17786..18349
DNA (564bp) protein (188aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q64QH5_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50256.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_000G1_scaffold_605_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18379..21384
DNA (3006bp) protein (1002aa)
Putative lipoprotein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WV12_BACF6
Putative lipoprotein {ECO:0000313|EMBL:CBW23816.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
putative lipoprotein
L3_082_000G1_scaffold_605_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21788..22567)
DNA (780bp) protein (260aa)
Putative 7-alpha-hydroxysteroid dehydrogenase (Bile acid catabolism) n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WV11_BACF6
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EXY89435.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hdhA; putative 7-alpha-hydroxysteroid dehydrogenase (bile acid catabolism)
L3_082_000G1_scaffold_605_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23504..24364
DNA (861bp) protein (287aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q64QH8_BACFR
Putative exported protein {ECO:0000313|EMBL:EXY89442.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_000G1_scaffold_605_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24374..24769
DNA (396bp) protein (132aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WV09_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY94002.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_000G1_scaffold_605_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24833..25297
DNA (465bp) protein (155aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WV08_BACF6
hypothetical protein
MaoC like domain protein {ECO:0000313|EMBL:EXY89433.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_000G1_scaffold_605_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25541..26269
DNA (729bp) protein (243aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WV07_BACF6
hypothetical protein
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:EXZ77356.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_082_000G1_scaffold_605_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26506..27105)
DNA (600bp) protein (200aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64QI2_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ77355.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_082_000G1_scaffold_605_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27288..29135)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6I9N3_9BACE
putative lipoprotein
Fibrobacter succinogenes major paralogous domain protein {ECO:0000313|EMBL:EXY87505.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_000G1_scaffold_605_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29458..30315)
DNA (858bp) protein (286aa)
AraC family transcriptional regulator n=11 Tax=Bacteroides RepID=Q64QI4_BACFR
putative AraC-family regulatory protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EXY87500.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_000G1_scaffold_605_24
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30401..31063)
DNA (663bp) protein (221aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Uracil-DNA glycosylase 1 n=6 Tax=Bacteroides RepID=UNG1_BACFR
putative uracil-DNA glycosylase
L3_082_000G1_scaffold_605_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31171..31497)
DNA (327bp) protein (109aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WV02_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY44330.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_082_000G1_scaffold_605_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31806..33092
DNA (1287bp) protein (429aa)
MATE efflux family protein n=3 Tax=Bacteroides fragilis RepID=I8X7R3_BACFG
putative cation effux pump BexA
MATE efflux family protein {ECO:0000313|EMBL:EXY83368.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L3_082_000G1_scaffold_605_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33100..33642)
DNA (543bp) protein (181aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I9M7_9BACE
putative acetyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:EXZ77347.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_082_000G1_scaffold_605_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33848..34006)
DNA (159bp) protein (53aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=Q64QI9_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50242.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_000G1_scaffold_605_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34228..35427
DNA (1200bp) protein (400aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I3HNI7_BACFG
putative alpha-1,6-mannanase
Uncharacterized protein {ECO:0000313|EMBL:EIY93991.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_000G1_scaffold_605_30
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35558..38713
DNA (3156bp) protein (1052aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JTW3_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEZ24438.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
Displaying items 1-30 of 44 in total

View Taxonomy