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L3_082_000G1_scaffold_3925

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_3925_1
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..199
DNA (198bp) protein (66aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA79_9ACTN
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEA90807.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
UDP-2-acetamido-2,6-dideoxy-b-L-lyxo-4-hexulose 4-reductase
L3_082_000G1_scaffold_3925_2
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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206..1387
DNA (1182bp) protein (394aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EEA90808.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EEA90808.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA80_9ACTN
L3_082_000G1_scaffold_3925_3
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1419..2492
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LX41_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV67693.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_082_000G1_scaffold_3925_4
unknown

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2489..3832
DNA (1344bp) protein (448aa)

This feature has no annotations

L3_082_000G1_scaffold_3925_5
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3825..4937
DNA (1113bp) protein (371aa)
glycosyl transferase family protein (EC:2.-.-.-)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E5V3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU91211.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
L3_082_000G1_scaffold_3925_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4949..6049
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IH66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49927.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
polysaccharide pyruvyl transferase
L3_082_000G1_scaffold_3925_7
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6049..7257
DNA (1209bp) protein (403aa)
Coenzyme F420-reducing hydrogenase beta subunit n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IQ30_9PROT
Coenzyme F420-reducing hydrogenase beta subunit {ECO:0000313|EMBL:CDB40092.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_082_000G1_scaffold_3925_8
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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7257..8717
DNA (1461bp) protein (487aa)
Polysaccharide biosynthesis protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LID2_TREBD
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEE16173.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L3_082_000G1_scaffold_3925_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8727..9848
DNA (1122bp) protein (374aa)
UDP-N-Acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E9M3_9ACTN
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KGI73613.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_000G1_scaffold_3925_10
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9864..10298
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SVT5_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55641.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
Displaying 10 items

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