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L3_082_000G1_scaffold_2172

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_2172_1
unknown

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1..126
DNA (126bp) protein (42aa)

This feature has no annotations

L3_082_000G1_scaffold_2172_2
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(355..1956)
DNA (1602bp) protein (534aa)
Transcriptional regulator, LuxR family n=2 Tax=Eggerthella RepID=C8WN36_EGGLE
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV56759.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_082_000G1_scaffold_2172_3
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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2338..3426
DNA (1089bp) protein (363aa)
Tat pathway signal sequence domain protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HRQ5_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EGC87840.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_082_000G1_scaffold_2172_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3705..5519)
DNA (1815bp) protein (605aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Threonine--tRNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Y8_9ACTN
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase
L3_082_000G1_scaffold_2172_5
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5677..6108)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1XXI0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:ERI04707.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
hypothetical protein
L3_082_000G1_scaffold_2172_6
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7076..8383)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KVP1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS50440.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L3_082_000G1_scaffold_2172_7
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8710..9426)
DNA (717bp) protein (239aa)
Cytidylyltransferase n=1 Tax=Clostridium sp. CAG:167 RepID=R5VTT9_9CLOT
Cytidylyltransferase {ECO:0000313|EMBL:CCZ91209.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
CMP-N-acetylneuraminic acid synthetase
L3_082_000G1_scaffold_2172_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9447..10532)
DNA (1086bp) protein (362aa)
orr; ornithine racemase (EC:5.1.1.12)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F7V3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07483.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_082_000G1_scaffold_2172_9
unknown

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comp(10555..12288)
DNA (1734bp) protein (578aa)

This feature has no annotations

L3_082_000G1_scaffold_2172_10
Treponema pedis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(12298..13695)
DNA (1398bp) protein (466aa)
Polysaccharide biosynthesis protein n=1 Tax=Treponema pedis str. T A4 RepID=S5ZRN0_9SPIO
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AGT42685.1}; TaxID=1291379 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema pedis str. T A4.;"
L3_082_000G1_scaffold_2172_11
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13695..14876)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CIZ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD77940.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
hypothetical protein
L3_082_000G1_scaffold_2172_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14881..15495)
DNA (615bp) protein (205aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AE63_9CLOT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFC99898.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_082_000G1_scaffold_2172_13
Bifidobacterium thermacidophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(15503..16540)
DNA (1038bp) protein (346aa)
Glycosyl transferase family 2 {ECO:0000313|EMBL:KFJ00365.1}; EC=2.4.1.212 {ECO:0000313|EMBL:KFJ00365.1};; EC=2.4.1.226 {ECO:0000313|EMBL:KFJ00365.1};; TaxID=212365 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermacidophilum subsp. porcinum.;"
Glycosyl transferase family 2 n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H404_9BIFI
family 2 glycosyl transferase
L3_082_000G1_scaffold_2172_14
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16537..17775)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CLJ2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD78218.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
polysaccharide polymerase
L3_082_000G1_scaffold_2172_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17765..18967)
DNA (1203bp) protein (401aa)
Glycosyl transferases group 1 family protein n=1 Tax=Clostridium difficile F501 RepID=T4C0L4_CLODI
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EQI14791.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
glycosyl transferase
L3_082_000G1_scaffold_2172_16
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18964..19116)
DNA (153bp) protein (51aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZDI2_9ACTN
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD41514.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
Displaying 16 items

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