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L3_082_000G1_scaffold_887

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_887_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(91..1041)
DNA (951bp) protein (317aa)
Adenine specific DNA methylase Mod (EC:2.1.1.72)
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:CBK77335.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBK77335.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Adenine specific DNA methylase Mod n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI11_CLOSC
L3_082_000G1_scaffold_887_2
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1299..1439)
DNA (141bp) protein (47aa)
Mod (Fragment) n=1 Tax=Trueperella pyogenes RepID=A0EVR8_9ACTO
Mod {ECO:0000313|EMBL:ABF68769.1}; Flags: Fragment;; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
L3_082_000G1_scaffold_887_3
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1439..2527)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FB14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47549.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L3_082_000G1_scaffold_887_4
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2520..2978)
DNA (459bp) protein (153aa)
Helicase protein n=1 Tax=Actinomyces graevenitzii F0530 RepID=U1RCL7_9ACTO
Helicase protein {ECO:0000313|EMBL:ERH17373.1}; TaxID=1321817 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii F0530.;"
DEAD/DEAH box helicase-like protein
L3_082_000G1_scaffold_887_5
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3122..3928
DNA (807bp) protein (269aa)
Membrane protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R2Z4_9CLOT
Membrane protein {ECO:0000313|EMBL:EPR12916.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
membrane protein
L3_082_000G1_scaffold_887_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3939..5591
DNA (1653bp) protein (551aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile F501 RepID=T4BT33_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI12415.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
LuxR family transcriptional regulator
L3_082_000G1_scaffold_887_7
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5679..7388)
DNA (1710bp) protein (570aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6C144_9ACTN
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein {ECO:0000313|EMBL:BAN77618.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L3_082_000G1_scaffold_887_8
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7930..8364
DNA (435bp) protein (145aa)
Peptidyl-tRNA hydrolase domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCV6_9ACTN
Peptidyl-tRNA hydrolase domain protein {ECO:0000313|EMBL:EEA89868.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
class I peptide chain release factor
L3_082_000G1_scaffold_887_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8401..9651)
DNA (1251bp) protein (417aa)
Transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C8WN48_EGGLE
LuxR family transcriptional regulator
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI11978.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_082_000G1_scaffold_887_10
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10254..11864
DNA (1611bp) protein (537aa)
fumarate reductase n=1 Tax=Desulfitobacterium hafniense RepID=UPI000364A5D7
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Putative fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:BAE83180.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_082_000G1_scaffold_887_11
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11998..12759)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WKE1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX69470.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
Protein tyrosine/serine phosphatase
L3_082_000G1_scaffold_887_12
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12856..13404)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KBW0_METBM
carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:CCJ35676.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
L3_082_000G1_scaffold_887_13
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13401..15560)
DNA (2160bp) protein (720aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WMT1_EGGLE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EGC90591.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_082_000G1_scaffold_887_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15679..16485)
DNA (807bp) protein (269aa)
Methyltransferase, YaeB family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJE7_9FIRM
Methyltransferase, YaeB family {ECO:0000313|EMBL:EFQ06706.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_082_000G1_scaffold_887_15
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16662..18026
DNA (1365bp) protein (455aa)
UPF0210 protein BN494_01130 n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5G187_9ACTN
UPF0210 protein HMPREF1493_1289 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L3_082_000G1_scaffold_887_16
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18230..19999
DNA (1770bp) protein (590aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZA50_9ACTN
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDD43050.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
family 5 extracellular solute-binding protein
L3_082_000G1_scaffold_887_17
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20691..22037
DNA (1347bp) protein (449aa)
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00275652};; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KU43_9ACTN
hypothetical protein
L3_082_000G1_scaffold_887_18
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22176..22856)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI0003460419
Phage shock protein A (IM30), suppresses sigma54-dependent transcription
Phage shock protein A (IM30), suppresses sigma54-dependent transcription {ECO:0000313|EMBL:CBL03860.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_082_000G1_scaffold_887_19
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22977..24056)
DNA (1080bp) protein (360aa)
hypothetical protein n=2 Tax=Coriobacteriaceae RepID=UPI00036F4FD4
Uncharacterized protein {ECO:0000313|EMBL:EOS50245.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L3_082_000G1_scaffold_887_20
unknown

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comp(24281..24775)
DNA (495bp) protein (165aa)

This feature has no annotations

L3_082_000G1_scaffold_887_21
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24759..25073)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GB12_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90506.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
RelB antitoxin
L3_082_000G1_scaffold_887_22
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25191..25913)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q251C7_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE82115.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_082_000G1_scaffold_887_23
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26024..27628)
DNA (1605bp) protein (535aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q251C9_DESHY
hypothetical protein
L3_082_000G1_scaffold_887_24
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27744..29096)
DNA (1353bp) protein (451aa)
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00275652};; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KU43_9ACTN
hypothetical protein
L3_082_000G1_scaffold_887_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29611..31332
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002F41259
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30200.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
gamma-glutamyltransferase
L3_082_000G1_scaffold_887_26
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31946..33700)
DNA (1755bp) protein (585aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZA50_9ACTN
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDD43050.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
family 5 extracellular solute-binding protein
L3_082_000G1_scaffold_887_27
unknown

Not on your lists

33724..34494
DNA (771bp) protein (257aa)

This feature has no annotations

L3_082_000G1_scaffold_887_28
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34422..35777)
DNA (1356bp) protein (452aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N599_SLAHD
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_082_000G1_scaffold_887_29
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36186..36650
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034B30EF
VanZ-like protein {ECO:0000313|EMBL:CDD39691.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
Predicted integral membrane protein
L3_082_000G1_scaffold_887_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36785..37066
DNA (282bp) protein (94aa)
Mo-co oxidoreductase dimerization domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BR25_CLODI
Mo-co oxidoreductase dimerization domain protein {ECO:0000313|EMBL:EQI11715.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
molybdopterin binding oxidoreductase
Displaying items 1-30 of 33 in total

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