ggKbase home page

L3_082_000G1_scaffold_964

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_964_1
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(313..816)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=C8WJV3_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGI75093.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_082_000G1_scaffold_964_2
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1624..5400)
DNA (3777bp) protein (1259aa)
Helicase {ECO:0000313|EMBL:KFI83869.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI83869.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
SNF2 family N-terminal domain protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5W7_9BIFI
DNA/RNA helicase
L3_082_000G1_scaffold_964_3
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5428..7791)
DNA (2364bp) protein (788aa)
UvrABC system protein B n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WJQ3_9ACTN
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
excinuclease ABC subunit B
L3_082_000G1_scaffold_964_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7881..8279)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDP7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75791.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
molybdopterin converting factor, large subunit
L3_082_000G1_scaffold_964_5
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8620..9147
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F127_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF03030.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_082_000G1_scaffold_964_6
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9339..10598
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F128_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF03031.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
L3_082_000G1_scaffold_964_7
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10775..11299
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F127_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF03030.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_082_000G1_scaffold_964_8
unknown

Not on your lists

11296..12873
DNA (1578bp) protein (526aa)

This feature has no annotations

L3_082_000G1_scaffold_964_9
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12985..13548
DNA (564bp) protein (188aa)
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Bacteria RepID=E5XBS1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72224.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_082_000G1_scaffold_964_10
unknown

Not on your lists

13545..15116
DNA (1572bp) protein (524aa)

This feature has no annotations

L3_082_000G1_scaffold_964_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15337..16512
DNA (1176bp) protein (392aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XAQ1_9ACTN
molybdenum cofactor biosynthesis protein A
L3_082_000G1_scaffold_964_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16519..17142
DNA (624bp) protein (208aa)
Molybdenum cofactor biosynthesis protein C n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA50_9ACTN
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EEP44359.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
GTP cyclohydrolase subunit MoaC
L3_082_000G1_scaffold_964_13
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17306..18298
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=2 Tax=Eggerthella RepID=E5XB82_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC87896.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_082_000G1_scaffold_964_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18571..19683)
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F818_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP45136.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
CysA; sulfate/molybdate ABC transporter ATPase
L3_082_000G1_scaffold_964_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19680..21173)
DNA (1494bp) protein (498aa)
Molybdate ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E737_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73560.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
molybdate ABC transporter permease
L3_082_000G1_scaffold_964_16
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21349..22257)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGU6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67233.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
molybdenum ABC transporter periplasmic molybdate-binding protein
L3_082_000G1_scaffold_964_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22474..22980)
DNA (507bp) protein (169aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E740_9ACTN
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:EBA40549.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
molybdopterin adenylyltransferase
L3_082_000G1_scaffold_964_18
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23037..24296)
DNA (1260bp) protein (420aa)
Molybdenum cofactor synthesis domain protein n=3 Tax=Eggerthella RepID=C8WN16_EGGLE
molybdenum cofactor synthesis domain-containing protein
Putative molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:EGC87961.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_082_000G1_scaffold_964_19
Cryptobacterium curtum, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24347..25747)
DNA (1401bp) protein (467aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|SAAS:SAAS00049907}; EC=2.7.7.77 {ECO:0000256|SAAS:SAAS00049907};; TaxID=469378 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium.;" source="Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3).;"
Molybdopterin-guanine dinucleotide biosynthesis protein MobB n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7ML65_CRYCD
molybdopterin-guanine dinucleotide biosynthesis protein MobB
L3_082_000G1_scaffold_964_20
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26004..26840
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EAE0_9ACTN
conserved hypothetical protein TIGR00370
Uncharacterized protein {ECO:0000313|EMBL:CBL04687.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_082_000G1_scaffold_964_21
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26842..27843
DNA (1002bp) protein (334aa)
Allophanate hydrolase subunit 2 n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UY45_EEGSY
DUR1; allophanate hydrolase subunit 2
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:BAK43495.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L3_082_000G1_scaffold_964_22
Coriobacteriaceae bacterium 68-1-3, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27843..28613
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI000362B594
LamB/YcsF family protein
UPF0271 protein JI75_06985 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1531429 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae.;" source="Coriobacteriaceae bacterium 68-1-3.;"
L3_082_000G1_scaffold_964_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28962..30533)
DNA (1572bp) protein (524aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64299.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
5'-nucleotidase
L3_082_000G1_scaffold_964_24
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30729..31610)
DNA (882bp) protein (294aa)
Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LI72_9FIRM
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EET59727.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
phosphonate ABC transporter inner membrane protein
L3_082_000G1_scaffold_964_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31623..32480)
DNA (858bp) protein (286aa)
Phosphonate ABC transporter, permease PhnE n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYZ0_9FIRM
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KJF41047.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
phosphonate ABC transporter permease
L3_082_000G1_scaffold_964_26
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32477..33316)
DNA (840bp) protein (280aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LI70_9FIRM
phosphonate ABC transporter ATP-binding protein
L3_082_000G1_scaffold_964_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33431..34567)
DNA (1137bp) protein (379aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA40_9FIRM
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EDS11718.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
phosphonate ABC transporter periplasmic phosphonate-binding protein
L3_082_000G1_scaffold_964_28
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35073..35915)
DNA (843bp) protein (281aa)
rRNA methylase n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N3L5_SLAHD
rRNA methylase
rRNA methylase {ECO:0000313|EMBL:ACV21606.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_082_000G1_scaffold_964_29
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(36084..37301)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WJX9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX69793.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
SSU ribosomal protein S1P
L3_082_000G1_scaffold_964_30
Sutterella sp. CAG:351, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37950..38495
DNA (546bp) protein (182aa)
Flavocytochrome c n=1 Tax=Sutterella sp. CAG:351 RepID=R7IGS6_9BURK
Flavocytochrome c {ECO:0000313|EMBL:CDE49757.1}; TaxID=1262975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:351.;"
polyferredoxin
Displaying items 1-30 of 31 in total

View Taxonomy