ggKbase home page

L3_082_000G1_scaffold_2371

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_2371_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..251
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01504.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Transposase DDE domain.
L3_082_000G1_scaffold_2371_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

503..2371
DNA (1869bp) protein (623aa)
Polysaccharide biosynthesis protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9F3_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEV01503.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted nucleoside-diphosphate sugar epimerases
L3_082_000G1_scaffold_2371_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2384..3667
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLM9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07781.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3711..4298
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLN0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07782.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4295..4903
DNA (609bp) protein (203aa)
Bacterial sugar transferase {ECO:0000313|EMBL:EEV01500.1}; EC=2.4.1.- {ECO:0000313|EMBL:EEV01500.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Sugar transferases involved in lipopolysaccharide synthesis n=3 Tax=Roseburia intestinalis RepID=D4KLN1_9FIRM
Sugar transferases involved in lipopolysaccharide synthesis
L3_082_000G1_scaffold_2371_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4900..5811
DNA (912bp) protein (304aa)
3-beta hydroxysteroid dehydrogenase/isomerase family. (EC:5.1.3.2)
3-beta hydroxysteroid dehydrogenase/isomerase family {ECO:0000313|EMBL:CBL07784.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBL07784.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
3-beta hydroxysteroid dehydrogenase/isomerase family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLN2_9FIRM
L3_082_000G1_scaffold_2371_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6081..7232
DNA (1152bp) protein (384aa)
Glycosyltransferase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLN4_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBL07786.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7238..8032
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2G7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13807.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_082_000G1_scaffold_2371_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8090..8917
DNA (828bp) protein (276aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=2 Tax=Roseburia intestinalis RepID=D4KLN5_9FIRM
ABC-type polysaccharide/polyol phosphate export systems, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8928..9665
DNA (738bp) protein (246aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=Roseburia intestinalis RepID=D4L2H0_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBL07788.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9689..11518
DNA (1830bp) protein (610aa)
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2H1_9FIRM
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases {ECO:0000313|EMBL:CBL13811.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L3_082_000G1_scaffold_2371_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11537..12634
DNA (1098bp) protein (366aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:CBL13812.1}; EC=5.4.99.9 {ECO:0000313|EMBL:CBL13812.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
UDP-galactopyranose mutase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2H2_9FIRM
L3_082_000G1_scaffold_2371_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12637..14493
DNA (1857bp) protein (619aa)
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLN8_9FIRM
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases {ECO:0000313|EMBL:CBL07790.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L3_082_000G1_scaffold_2371_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14509..15477
DNA (969bp) protein (323aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLN9_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL07791.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15474..16739
DNA (1266bp) protein (422aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLP0_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL07792.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16767..17159
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLP1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07793.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_082_000G1_scaffold_2371_17
unknown

Not on your lists

comp(17211..17408)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 17 items

View Taxonomy