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L3_082_000G1_scaffold_2294

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_2294_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..881)
DNA (879bp) protein (293aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Clostridiales RepID=H1C6Q9_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ERI62522.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_082_000G1_scaffold_2294_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(878..2047)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XVX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13809.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase
L3_082_000G1_scaffold_2294_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(2104..3111)
DNA (1008bp) protein (336aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYU6_9FIRM
L3_082_000G1_scaffold_2294_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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3346..4725
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFQ1_9FIRM
L3_082_000G1_scaffold_2294_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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4753..5790
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X954_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48023.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M42
L3_082_000G1_scaffold_2294_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5787..6812
DNA (1026bp) protein (342aa)
endoglucanase M (EC:3.2.1.4)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X955_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48024.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_2294_7
unknown

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6830..7123
DNA (294bp) protein (98aa)

This feature has no annotations

L3_082_000G1_scaffold_2294_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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7179..8180
DNA (1002bp) protein (334aa)
cellulase (EC:3.2.1.4)
Endoglucanase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X956_9FIRM
Endoglucanase {ECO:0000313|EMBL:EGJ48025.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_2294_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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8243..9496
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XU99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13244.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ynbB; putative protein YnbB
L3_082_000G1_scaffold_2294_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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9552..10256
DNA (705bp) protein (235aa)
Sporulation protein YunB n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCC9_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:ESL13242.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_082_000G1_scaffold_2294_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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10278..12251
DNA (1974bp) protein (658aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFP6_9FIRM
L3_082_000G1_scaffold_2294_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(12483..13211)
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein N510_02143 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEX8_9FIRM
Probable transcriptional regulatory protein N510_02143 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_082_000G1_scaffold_2294_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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13924..15462
DNA (1539bp) protein (513aa)
SSS family solute:Na+ symporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHH9_9FIRM
SSS family solute:Na+ symporter {ECO:0000313|EMBL:EGJ45465.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
SSS family transporter
L3_082_000G1_scaffold_2294_14
unknown

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comp(16178..16603)
DNA (426bp) protein (142aa)

This feature has no annotations

L3_082_000G1_scaffold_2294_15
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16974..17312
DNA (339bp) protein (113aa)
PF12986 structural domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1G6_9CLOT
PF12986 structural domain protein {ECO:0000313|EMBL:EJF39280.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_082_000G1_scaffold_2294_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17471..18130
DNA (660bp) protein (220aa)
dihydroorotase (EC:3.5.2.3)
D-aminoacylase, C-terminal domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H246_9CLOT
D-aminoacylase, C-terminal domain protein {ECO:0000313|EMBL:EJF39303.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Displaying 16 items

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