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L3_082_000G1_scaffold_1034

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_1034_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(227..442)
DNA (216bp) protein (72aa)
Transcriptional regulator n=2 Tax=Enterococcus faecium RepID=C9BHH3_ENTFC
Transcriptional regulator {ECO:0000313|EMBL:EEV51750.1}; TaxID=565659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,141,733.;"
hypothetical protein
L3_082_000G1_scaffold_1034_2
unknown

Not on your lists

533..817
DNA (285bp) protein (95aa)

This feature has no annotations

L3_082_000G1_scaffold_1034_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(893..1768)
DNA (876bp) protein (292aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQZ0_9FIRM
L3_082_000G1_scaffold_1034_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(2049..2510)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZK50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15020.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
conserved hypothetical protein
L3_082_000G1_scaffold_1034_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2532..2996)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45778.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1034_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3035..5599)
DNA (2565bp) protein (855aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=Oscillibacter RepID=U2RKV0_9FIRM
L3_082_000G1_scaffold_1034_7
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(5699..7642)
DNA (1944bp) protein (648aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZK46_9FIRM
L3_082_000G1_scaffold_1034_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7796..8056)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45775.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1034_9
unknown

Not on your lists

comp(8066..8335)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_082_000G1_scaffold_1034_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8349..9452)
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG9_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
recF; DNA replication and repair protein RecF
L3_082_000G1_scaffold_1034_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(9449..9664)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XZ65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15009.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_082_000G1_scaffold_1034_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(9678..10784)
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7)
DNA polymerase III, beta subunit n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF77_9FIRM
L3_082_000G1_scaffold_1034_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11027..12340)
DNA (1314bp) protein (438aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RY41_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaA; chromosomal replication initiator protein DnaA
L3_082_000G1_scaffold_1034_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


12811..12945
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HB55_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
50S ribosomal protein L34
L3_082_000G1_scaffold_1034_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13144..13503
DNA (360bp) protein (120aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rnpA; ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG3_9FIRM
L3_082_000G1_scaffold_1034_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13500..13718
DNA (219bp) protein (73aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG2_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1034_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

13762..15243
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YFA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15033.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_082_000G1_scaffold_1034_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15258..16073
DNA (816bp) protein (272aa)
SpoIIIJ-associated protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGF9_9FIRM
SpoIIIJ-associated protein {ECO:0000313|EMBL:EGJ45763.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Jag protein homolog
L3_082_000G1_scaffold_1034_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

16139..17455
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZK64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15035.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Orn/Lys/Arg decarboxylase
L3_082_000G1_scaffold_1034_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17489..18412
DNA (924bp) protein (308aa)
DNA polymerase III, delta' subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFS8_9FIRM
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EGJ45789.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA polymerase III subunit gamma and tau
L3_082_000G1_scaffold_1034_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18477..19724
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RIH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60286.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1034_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19808..20767
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45786.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
auxin efflux carrier
L3_082_000G1_scaffold_1034_23
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20772..21827
DNA (1056bp) protein (352aa)
Membrane protein AbrB duplication n=2 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=U4Q9K0_TEPAE
Membrane protein AbrB duplication
Membrane protein AbrB duplication {ECO:0000313|EMBL:CDI40999.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L3_082_000G1_scaffold_1034_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21955..23133
DNA (1179bp) protein (393aa)
Stage II sporulation protein P n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG21_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:EGJ45702.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIP; stage II sporulation protein P
L3_082_000G1_scaffold_1034_25
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23306..24190)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15513.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_082_000G1_scaffold_1034_26
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(24384..25991)
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YFG3_9FIRM
L3_082_000G1_scaffold_1034_27
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

26329..26757
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14456.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_082_000G1_scaffold_1034_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26754..28169
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X992_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48061.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1034_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28299..29786)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45700.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1034_30
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

29983..30756
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13358.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
transporter
Displaying items 1-30 of 33 in total

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