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L3_082_000G1_scaffold_1093

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_1093_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..87)
DNA (87bp) protein (29aa)
MATE efflux family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9S3_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENY92436.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative efflux protein, MATE family
L3_082_000G1_scaffold_1093_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(65..442)
DNA (378bp) protein (126aa)
MATE efflux family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9S3_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENY92436.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative efflux protein, MATE family
L3_082_000G1_scaffold_1093_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(444..1064)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44841.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator
L3_082_000G1_scaffold_1093_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1464..2324)
DNA (861bp) protein (287aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EDS12000.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EDS12000.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EDS12000.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (EC:4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8X5_9FIRM
L3_082_000G1_scaffold_1093_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2317..3285)
DNA (969bp) protein (323aa)
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EDS10852.1}; EC=2.7.1.45 {ECO:0000313|EMBL:EDS10852.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
2-dehydro-3-deoxygluconokinase (EC:2.7.1.45)
2-dehydro-3-deoxygluconokinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PC97_9FIRM
L3_082_000G1_scaffold_1093_6
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3311..4354)
DNA (1044bp) protein (348aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=Olsenella profusa F0195 RepID=U2T1T6_9ACTN
Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:ERL07029.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
LacI family transcriptional regulator
L3_082_000G1_scaffold_1093_7
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4466..5119)
DNA (654bp) protein (218aa)
Demethylmenaquinone methyltransferase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAY9_9PLAN
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EDL58065.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
RraA-like protein
L3_082_000G1_scaffold_1093_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5151..6146)
DNA (996bp) protein (332aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDS12718.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDS12718.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P693_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase protein
L3_082_000G1_scaffold_1093_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6137..6916)
DNA (780bp) protein (260aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.125)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBK76885.1}; EC=1.1.1.125 {ECO:0000313|EMBL:CBK76885.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DGR1_CLOSC
L3_082_000G1_scaffold_1093_10
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(6930..7715)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PSU5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL70444.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
hypothetical protein
L3_082_000G1_scaffold_1093_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7773..9044)
DNA (1272bp) protein (424aa)
TRAP transporter, DctM subunit n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKP6_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EEQ58172.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
TRAP transporter, DctM subunit
L3_082_000G1_scaffold_1093_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9041..9532)
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RJH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ49301.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_082_000G1_scaffold_1093_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9649..10689)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RJH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18553.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
TRAP dicarboxylate transporter subunit DctP
L3_082_000G1_scaffold_1093_14
unknown

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comp(11067..11573)
DNA (507bp) protein (169aa)

This feature has no annotations

L3_082_000G1_scaffold_1093_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(11570..11770)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZJD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14750.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_082_000G1_scaffold_1093_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12436..13191
DNA (756bp) protein (252aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45462.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1093_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13343..13858
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CL76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23691.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_082_000G1_scaffold_1093_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14045..14680
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46339.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1093_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14928..16145
DNA (1218bp) protein (406aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAX5_9FIRM
L3_082_000G1_scaffold_1093_20
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

16279..17658
DNA (1380bp) protein (460aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEX0_9FIRM
L3_082_000G1_scaffold_1093_21
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17779..18720
DNA (942bp) protein (314aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TKI5_9FIRM
L3_082_000G1_scaffold_1093_22
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

18861..20081
DNA (1221bp) protein (407aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZI42_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_082_000G1_scaffold_1093_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

20174..21031
DNA (858bp) protein (286aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XWU6_9FIRM
L3_082_000G1_scaffold_1093_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

21059..22237
DNA (1179bp) protein (393aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCQ3_9FIRM
L3_082_000G1_scaffold_1093_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22303..23226
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAX9_9FIRM
L3_082_000G1_scaffold_1093_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23513..24352)
DNA (840bp) protein (280aa)
Two-component system, response regulator YcbB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCU9_9FIRM
Two-component system, response regulator YcbB {ECO:0000313|EMBL:EGJ46645.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
FOG: CheY-like receiver
L3_082_000G1_scaffold_1093_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24349..25665)
DNA (1317bp) protein (439aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCU8_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_082_000G1_scaffold_1093_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25869..27089
DNA (1221bp) protein (407aa)
Threonine ammonia-lyase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFY2_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:EGJ45843.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
threonine dehydratase
L3_082_000G1_scaffold_1093_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27172..27717
DNA (546bp) protein (182aa)
Nitroreductase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX47_9CLOT
Nitroreductase {ECO:0000313|EMBL:CDC49944.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Nitroreductase
L3_082_000G1_scaffold_1093_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27998..28657
DNA (660bp) protein (220aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFY4_9FIRM
Displaying items 1-30 of 37 in total

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