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L3_082_000G1_scaffold_1163

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_1163_1
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22..864)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LI42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS58385.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
integrase family protein
L3_082_000G1_scaffold_1163_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1073..2467
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46771.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1163_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2567..4651)
DNA (2085bp) protein (695aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hppA; pyrophosphate-energized inorganic pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCY0_9FIRM
L3_082_000G1_scaffold_1163_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4821..6257)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46677.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
trkH; Trk system potassium uptake protein TrkH
L3_082_000G1_scaffold_1163_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6254..7651)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46678.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
potassium transporter
L3_082_000G1_scaffold_1163_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(7784..8503)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YII5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15412.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_082_000G1_scaffold_1163_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8829..9311)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48199.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1163_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9304..9747)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48200.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1163_9
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9940..10149
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TW95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72176.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_082_000G1_scaffold_1163_10
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10340..10963)
DNA (624bp) protein (208aa)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:448 RepID=R6T0Y9_9CLOT
Cytidylate kinase {ECO:0000313|EMBL:CDC61381.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
Cytidylate kinase
L3_082_000G1_scaffold_1163_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10960..12339)
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSS6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM45122.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative efflux protein, MATE family
L3_082_000G1_scaffold_1163_12
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13011..15620
DNA (2610bp) protein (870aa)
Iron-containing alcohol dehydrogenase n=2 Tax=root RepID=R5MZ65_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
iron-containing alcohol dehydrogenase
L3_082_000G1_scaffold_1163_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15745..17067)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DHU4_CLODI
MATE efflux family protein {ECO:0000313|EMBL:EQF27504.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
MATE efflux family protein
L3_082_000G1_scaffold_1163_14
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17252..18001)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XWN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGP75442.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
hypothetical protein
L3_082_000G1_scaffold_1163_15
unknown

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comp(18113..18778)
DNA (666bp) protein (222aa)

This feature has no annotations

L3_082_000G1_scaffold_1163_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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19005..20339
DNA (1335bp) protein (445aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
tRNA nucleotidyltransferase (CCA-adding enzyme) n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD02_9FIRM
tRNA nucleotidyltransferase (CCA-adding enzyme) {ECO:0000313|EMBL:EGJ46698.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1163_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20407..21201)
DNA (795bp) protein (265aa)
Metal cation transporter, ZIP family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6E4_9FIRM
Metal cation transporter, ZIP family {ECO:0000313|EMBL:EDS12769.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
zinc/iron permease
L3_082_000G1_scaffold_1163_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21289..22257)
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
tRNA-dihydrouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ02_9FIRM
dihydrouridine synthase family protein
L3_082_000G1_scaffold_1163_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22258..22746)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W607_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38582.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Flavodoxins
L3_082_000G1_scaffold_1163_20
unknown

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22869..23027
DNA (159bp) protein (53aa)

This feature has no annotations

L3_082_000G1_scaffold_1163_21
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23056..25347
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63387.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative surface layer protein
L3_082_000G1_scaffold_1163_22
unknown

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comp(25335..25598)
DNA (264bp) protein (88aa)

This feature has no annotations

L3_082_000G1_scaffold_1163_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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25679..26188
DNA (510bp) protein (170aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAC5_9FIRM
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EGJ47303.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
cob(I)yrinic acid a
L3_082_000G1_scaffold_1163_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26407..29034
DNA (2628bp) protein (876aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Oscillibacter RepID=U2QCG5_9FIRM
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:ERK57364.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_082_000G1_scaffold_1163_25
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(29478..30161)
DNA (684bp) protein (228aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QGE9_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ27780.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
transcriptional regulatory protein
L3_082_000G1_scaffold_1163_26
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30154..30873)
DNA (720bp) protein (240aa)
Transcriptional regulator GntR family n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVT7_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDE18741.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
GntR family transcriptional regulator
L3_082_000G1_scaffold_1163_27
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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31049..31915
DNA (867bp) protein (289aa)
PEP phosphonomutase-like enzyme n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BX99_ANAMD
PEP phosphonomutase-like enzyme
PEP phosphonomutase-like enzyme {ECO:0000313|EMBL:AFM21906.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
L3_082_000G1_scaffold_1163_28
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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31946..32812
DNA (867bp) protein (289aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=3 Tax=Bordetella bronchiseptica RepID=K4QLV3_BORBO
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:ETX30843.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
bcpA; carboxyvinyl-carboxyphosphonatephosphorylmutase
L3_082_000G1_scaffold_1163_29
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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32930..33904
DNA (975bp) protein (325aa)
aryldialkylphosphatase (EC:3.1.8.1)
UPI0003D01392 related cluster n=1 Tax=unknown RepID=UPI0003D01392
Putative hydrolase {ECO:0000313|EMBL:CDX14782.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Displaying 29 items

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