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L3_082_000G1_scaffold_1574

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_1574_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(324..1391)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45692.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1574_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1406..2494)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45693.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1574_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2491..3996)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45694.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spore germination protein KA
L3_082_000G1_scaffold_1574_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4375..4845)
DNA (471bp) protein (157aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative deaminase (EC:3.5.4.-)
Cytosine deaminase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG15_9FIRM
L3_082_000G1_scaffold_1574_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5007..6047)
DNA (1041bp) protein (347aa)
Tripartite tricarboxylate transporter family receptor n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZ55_9CLOT
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:EJF38425.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_082_000G1_scaffold_1574_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6115..7617)
DNA (1503bp) protein (501aa)
Tripartite tricarboxylate transporter TctA family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WPQ0_9CLOT
Tripartite tricarboxylate transporter TctA family protein {ECO:0000313|EMBL:EJF38416.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_082_000G1_scaffold_1574_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7633..8133)
DNA (501bp) protein (167aa)
Tripartite tricarboxylate transporter TctB family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZN0_9CLOT
Tripartite tricarboxylate transporter TctB family protein {ECO:0000313|EMBL:EJF38413.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
tripartite tricarboxylate transporter TctB family protein
L3_082_000G1_scaffold_1574_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8315..9514)
DNA (1200bp) protein (400aa)
CoA-transferase family III protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MVL9_9CLOT
CoA-transferase family III protein {ECO:0000313|EMBL:EJF38379.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_082_000G1_scaffold_1574_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9544..11100)
DNA (1557bp) protein (519aa)
Methylmalonyl-CoA carboxyltransferase 12S subunit (EC:2.1.3.1)
Carboxyl transferase domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZN4_9CLOT
Carboxyl transferase domain protein {ECO:0000313|EMBL:EJF38418.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_082_000G1_scaffold_1574_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11257..12129
DNA (873bp) protein (291aa)
LysR substrate-binding domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZH6_9CLOT
LysR substrate-binding domain protein {ECO:0000313|EMBL:EJF38343.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_082_000G1_scaffold_1574_11
unknown

Not on your lists

12256..12411
DNA (156bp) protein (52aa)

This feature has no annotations

L3_082_000G1_scaffold_1574_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12609..13703)
DNA (1095bp) protein (365aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG17_9FIRM
glyceraldehyde-3-phosphate dehydrogenase
L3_082_000G1_scaffold_1574_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13970..15031
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG18_9FIRM
sensor histidine kinase, copper metabolism
L3_082_000G1_scaffold_1574_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15164..16540)
DNA (1377bp) protein (459aa)
serine protease (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46454.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1574_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(16695..17855)
DNA (1161bp) protein (387aa)
Sporulation integral membrane protein YtvI n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XXH9_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:ESL14384.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
sporulation integral membrane protein YtvI
L3_082_000G1_scaffold_1574_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18051..18917)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46452.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
conserved hypothetical protein
L3_082_000G1_scaffold_1574_17
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(19222..20040)
DNA (819bp) protein (273aa)
Transcriptional regulator MerR family n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZHF4_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDD47913.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
merR regulatory family protein
L3_082_000G1_scaffold_1574_18
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

20122..20760
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A3H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD47911.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
hypothetical protein
L3_082_000G1_scaffold_1574_19
unknown

Not on your lists

comp(20753..20950)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_082_000G1_scaffold_1574_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21185..21982
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46363.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_1574_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21997..22206
DNA (210bp) protein (70aa)
UPF0291 protein BACCAP_00627 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR03_9FIRM
UPF0291 protein BACCAP_00627 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_082_000G1_scaffold_1574_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22203..23420
DNA (1218bp) protein (406aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative glycoside hydrolase (EC:3.2.1.-)
Beta-N-acetylhexosaminidase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGF8_9FIRM
L3_082_000G1_scaffold_1574_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23562..24821
DNA (1260bp) protein (420aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5S060_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EQN60278.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_1574_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24952..26016
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GTC1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91998.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
Displaying 24 items

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