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L3_082_000G1_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_261_1
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1647)
DNA (1647bp) protein (549aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EQJ0_9FIRM
hypothetical protein
L3_082_000G1_scaffold_261_2
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1662..3650)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 PF0_9FIRM">RepID=R7EPF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04550.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Predicted ATP-dependent endonuclease of the OLD family
L3_082_000G1_scaffold_261_3
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(3684..4790)
DNA (1107bp) protein (369aa)
Restriction enzyme BgcI subunit beta n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZBQ7_9FIRM
Restriction enzyme BgcI subunit beta {ECO:0000313|EMBL:CDD27912.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Type I restriction modification DNA specificity domain.
L3_082_000G1_scaffold_261_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4777..6726)
DNA (1950bp) protein (650aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPC6_9FIRM
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:CBL42661.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Type I restriction-modification system methyltransferase subunit
L3_082_000G1_scaffold_261_5
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6783..7931)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04559.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_082_000G1_scaffold_261_6
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7996..9345)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04560.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Predicted ATPase (AAA+ superfamily)
L3_082_000G1_scaffold_261_7
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9596..10705)
DNA (1110bp) protein (370aa)
Plasmid recombination enzyme n=1 Tax=Blautia sp. CAG:37 RepID=R7JYL3_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:CDE67897.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
pre; putative plasmid recombination enzyme
L3_082_000G1_scaffold_261_8
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(11091..13403)
DNA (2313bp) protein (771aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26550.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Primase 1
L3_082_000G1_scaffold_261_9
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13549..13782)
DNA (234bp) protein (78aa)
flagellar hook-length control protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B4C020
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK75726.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L3_082_000G1_scaffold_261_10
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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13942..14568
DNA (627bp) protein (209aa)
HTH domain-containing protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S0Q5_BUTPB
hypothetical protein
HTH domain-containing protein {ECO:0000313|EMBL:ADL33380.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L3_082_000G1_scaffold_261_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14667..15683
DNA (1017bp) protein (339aa)
recombinase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B5146B
site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:AEN95528.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_082_000G1_scaffold_261_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(15935..16339)
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDC9_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
rpsI; 30S ribosomal protein S9
L3_082_000G1_scaffold_261_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16358..16786)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=2 Tax=Clostridiales RepID=G9YW62_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
50S ribosomal protein L13
L3_082_000G1_scaffold_261_14
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

17053..17817
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y9X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13188.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
PP-loop domain-containing protein
L3_082_000G1_scaffold_261_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17973..18680
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46519.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
asparagine synthase
L3_082_000G1_scaffold_261_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18883..21234
DNA (2352bp) protein (784aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03694.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_082_000G1_scaffold_261_17
unknown

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comp(21386..22711)
DNA (1326bp) protein (442aa)

This feature has no annotations

L3_082_000G1_scaffold_261_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(22714..23622)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14751.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
phosphate ABC transporter substrate-binding protein
L3_082_000G1_scaffold_261_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23770..24342)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46529.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_261_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24810..26111)
DNA (1302bp) protein (434aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
enolase (EC:4.2.1.11)
Enolase n=2 Tax=Oscillibacter RepID=U2RWN0_9FIRM
L3_082_000G1_scaffold_261_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26221..27774)
DNA (1554bp) protein (518aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCZ7_9FIRM
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
L3_082_000G1_scaffold_261_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27939..28712)
DNA (774bp) protein (258aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCZ8_9FIRM
L3_082_000G1_scaffold_261_23
unknown

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comp(28815..28982)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_082_000G1_scaffold_261_24
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29027..30223)
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UNF3_9FIRM
L3_082_000G1_scaffold_261_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30278..30766)
DNA (489bp) protein (163aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD00_9FIRM
putative RNA methyltransferase
L3_082_000G1_scaffold_261_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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31144..31755
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46697.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_261_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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31929..32978
DNA (1050bp) protein (350aa)
Antibiotic transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RUU0_9FIRM
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:EQN60300.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC transporter
L3_082_000G1_scaffold_261_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32975..35011
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00366.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
L3_082_000G1_scaffold_261_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35011..36066
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00365.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_082_000G1_scaffold_261_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36111..36677)
DNA (567bp) protein (189aa)
Chromate transporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA74_9FIRM
Chromate transporter {ECO:0000313|EMBL:EGJ47252.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Chromate transport protein ChrA
Displaying items 1-30 of 101 in total

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