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L3_082_000G1_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000G1_scaffold_475_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..483
DNA (483bp) protein (161aa)
ntpI; V-type Na(+)-transporting ATPase I subunit (EC:3.6.3.15)
V-type Na(+)-transporting ATPase I subunit {ECO:0000313|EMBL:BAK99457.1}; EC=3.6.3.15 {ECO:0000313|EMBL:BAK99457.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
V-type Na(+)-transporting ATPase I subunit n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KPG9_OSCVS
L3_082_000G1_scaffold_475_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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502..1026
DNA (525bp) protein (175aa)
ntpK; V-type Na(+)-transporting ATPase K subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit K n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S9_9FIRM
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:EGJ47107.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_475_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1046..1735
DNA (690bp) protein (230aa)
V-type proton ATPase subunit E n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T0_9FIRM
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
V-type proton ATPase subunit E
L3_082_000G1_scaffold_475_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1924..2856
DNA (933bp) protein (311aa)
ntpC; V-type Na(+)-transporting ATPase C subunit (EC:3.6.3.15)
ATP synthase, subunit C n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CM48_9CLOT
ATP synthase, subunit C {ECO:0000313|EMBL:ERI68396.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_082_000G1_scaffold_475_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2870..3178
DNA (309bp) protein (103aa)
ntpG; V-type Na(+)-transporting ATPase G subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit F n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T2_9FIRM
V-type H+-transporting ATPase subunit F {ECO:0000313|EMBL:EGJ47110.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_475_6
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

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3175..3687
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6R1_9BACT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFB90021.1}; Flags: Fragment;; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
acetyltransferase
L3_082_000G1_scaffold_475_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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3732..5507
DNA (1776bp) protein (592aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ntpA; V-type Na(+)-transporting ATPase A subunit (EC:3.6.3.15)
V-type ATP synthase alpha chain n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T3_9FIRM
L3_082_000G1_scaffold_475_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5504..6880
DNA (1377bp) protein (459aa)
ntpB; V-type Na(+)-transporting ATPase B subunit (EC:3.6.3.15)
V-type ATP synthase beta chain n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T4_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_475_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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6893..7606
DNA (714bp) protein (238aa)
ntpD; V-type Na(+)-transporting ATPase D subunit (EC:3.6.3.15)
V-type ATP synthase subunit D n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T5_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_475_10
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7678..8586)
DNA (909bp) protein (303aa)
Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N6W7_CLOK5
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EDK33048.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L3_082_000G1_scaffold_475_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8831..9583
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQJ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07977.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
short-chain dehydrogenase
L3_082_000G1_scaffold_475_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9662..10780
DNA (1119bp) protein (373aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D3B8_CLOSY
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:ERI75997.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
sialic acid-binding periplasmic protein siaP
L3_082_000G1_scaffold_475_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10944..11762
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GTU9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91736.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_082_000G1_scaffold_475_14
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(11815..13026)
DNA (1212bp) protein (404aa)
Serine/threonine transporter SstT n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VGG4_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Na+/serine symporter
L3_082_000G1_scaffold_475_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(13291..14451)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YB63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12842.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_082_000G1_scaffold_475_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14483..15073)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48350.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_082_000G1_scaffold_475_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15103..15975)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53910.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_082_000G1_scaffold_475_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(16035..18278)
DNA (2244bp) protein (748aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEK3_9FIRM
L3_082_000G1_scaffold_475_19
unknown

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comp(18344..18721)
DNA (378bp) protein (126aa)

This feature has no annotations

L3_082_000G1_scaffold_475_20
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(18723..19589)
DNA (867bp) protein (289aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YB68_9FIRM
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:ESL12847.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_082_000G1_scaffold_475_21
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(19586..20263)
DNA (678bp) protein (226aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y8W3_9FIRM
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:ESL12848.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_082_000G1_scaffold_475_22
unknown

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comp(20287..20553)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_082_000G1_scaffold_475_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20586..22568)
DNA (1983bp) protein (661aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M7_9FIRM
DNA gyrase subunit B {ECO:0000313|EMBL:EGJ48353.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_082_000G1_scaffold_475_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

22784..23263
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12850.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_082_000G1_scaffold_475_25
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23308..25455)
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZI27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14085.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative transcription accessory protein
L3_082_000G1_scaffold_475_26
unknown

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comp(25528..26025)
DNA (498bp) protein (166aa)

This feature has no annotations

L3_082_000G1_scaffold_475_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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26704..26931
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RUX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL68011.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative transcriptional regulator
L3_082_000G1_scaffold_475_28
unknown

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26946..27638
DNA (693bp) protein (231aa)

This feature has no annotations

L3_082_000G1_scaffold_475_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27687..28631
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33034.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_082_000G1_scaffold_475_30
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

28660..29385
DNA (726bp) protein (242aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUZ6_9FIRM
Displaying items 1-30 of 63 in total

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