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L3_082_000M1_scaffold_1658

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000M1_scaffold_1658_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..90
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64419.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L3_082_000M1_scaffold_1658_2
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84..425
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9K845_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS42589.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Transposase and inactivated derivatives
L3_082_000M1_scaffold_1658_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(549..773)
DNA (225bp) protein (75aa)
Transposase IS66 n=2 Tax=unclassified Lachnospiraceae RepID=E5XHQ6_9FIRM
Transposase IS66 {ECO:0000313|EMBL:EFV19149.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_082_000M1_scaffold_1658_4
unknown

Not on your lists

comp(745..981)
DNA (237bp) protein (79aa)

This feature has no annotations

L3_082_000M1_scaffold_1658_5
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(978..1727)
DNA (750bp) protein (250aa)
Acetyltransferase n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K7I3_9BACE
Acetyltransferase {ECO:0000313|EMBL:EFI37683.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
acetyltransferase
L3_082_000M1_scaffold_1658_6
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1750..2862)
DNA (1113bp) protein (371aa)
UDP-galactopyranose mutase n=1 Tax=Eubacterium sp. CAG:252 RepID=R6L0E3_9FIRM
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDB67792.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
UDP-galactopyranose mutase
L3_082_000M1_scaffold_1658_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2864..4327)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WEE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59713.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_082_000M1_scaffold_1658_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4303..5508)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WEX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59712.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
polymerase
L3_082_000M1_scaffold_1658_9
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5685..6644)
DNA (960bp) protein (320aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFV02297.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFV02297.1};; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MFD7_9FIRM
hypothetical protein
L3_082_000M1_scaffold_1658_10
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6662..7888)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B7490E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFQ45984.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L3_082_000M1_scaffold_1658_11
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7908..8948)
DNA (1041bp) protein (347aa)
Putative glycosyl transferase n=1 Tax=Streptococcus pneumoniae RepID=Q4K1B1_STREE
Putative glycosyl transferase {ECO:0000313|EMBL:CAI33512.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
rhamnosyl transferase Cps6bS
L3_082_000M1_scaffold_1658_12
Streptococcus sinensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8945..9970)
DNA (1026bp) protein (342aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KGM36334.1}; EC=4.2.1.46 {ECO:0000313|EMBL:KGM36334.1};; TaxID=176090 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sinensis.;"
Putative dehydratase/epimerase (Arabinitol) Abp2 n=1 Tax=Streptococcus pneumoniae RepID=Q4K1B2_STREE
nucleoside-diphosphate-sugar epimerase
L3_082_000M1_scaffold_1658_13
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10010..10723)
DNA (714bp) protein (238aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003054096
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_082_000M1_scaffold_1658_14
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10720..11637)
DNA (918bp) protein (306aa)
LPS biosynthesis protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37E21
LPS biosynthesis protein {ECO:0000313|EMBL:ETP71058.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
lipopolysaccharide biosynthesis protein
L3_082_000M1_scaffold_1658_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11628..12386)
DNA (759bp) protein (253aa)
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIU8_9CLOT
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ERI69162.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
N-acetyl-mannosamine transferase
L3_082_000M1_scaffold_1658_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12387..12524)
DNA (138bp) protein (46aa)
mannose-6-phosphate isomerase, class I (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBH2_9CLOT
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:ERI69163.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_082_000M1_scaffold_1658_17
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12546..13856)
DNA (1311bp) protein (437aa)
Mannose-1-phosphate guanylyltransferase (EC:5.3.1.8)
Uncharacterized protein n=1 Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S0KHQ4_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOW80241.1}; TaxID=1121865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 = ATCC 51263.;"
L3_082_000M1_scaffold_1658_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13876..15549)
DNA (1674bp) protein (558aa)
Phosphomannomutase (EC:5.4.2.8)
Putative phosphoglucomutase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAF1_9CLOT
Putative phosphoglucomutase {ECO:0000313|EMBL:ERI69165.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_082_000M1_scaffold_1658_19
unknown

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comp(15814..15966)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_082_000M1_scaffold_1658_20
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16505..17734)
DNA (1230bp) protein (410aa)
Peptidase U32 n=1 Tax=Blautia sp. CAG:37 RepID=R7JPV1_9FIRM
Peptidase U32 {ECO:0000313|EMBL:CDE65661.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
peptidase U32
L3_082_000M1_scaffold_1658_21
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17731..18396)
DNA (666bp) protein (222aa)
Putative O-methyltransferase n=1 Tax=Blautia sp. CAG:37 RepID=R7JNY7_9FIRM
Putative O-methyltransferase {ECO:0000313|EMBL:CDE65659.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
O-methyltransferase
L3_082_000M1_scaffold_1658_22
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18427..18840)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JS55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE65657.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L3_082_000M1_scaffold_1658_23
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18867..19202)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7ED21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE00605.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
Protein of unknown function (DUF964).
L3_082_000M1_scaffold_1658_24
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19208..20872)
DNA (1665bp) protein (555aa)
Metallo-beta-lactamase family protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JKS8_9FIRM
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDE64525.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
putative hydrolase of the metallo-beta-lactamase superfamily protein
L3_082_000M1_scaffold_1658_25
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21051..21311)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JLN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64523.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Protein of unknown function (DUF1292).
L3_082_000M1_scaffold_1658_26
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21327..21770)
DNA (444bp) protein (148aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Putative Holliday junction resolvase n=1 Tax=Blautia sp. CAG:37 RepID=R7JLF1_9FIRM
conserved hypothetical protein TIGR00250
L3_082_000M1_scaffold_1658_27
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21782..22045)
DNA (264bp) protein (88aa)
UPF0297 protein BN630_00716 n=1 Tax=Blautia sp. CAG:37 RepID=R7JKS0_9FIRM
UPF0297 protein BN630_00716 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L3_082_000M1_scaffold_1658_28
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22252..24021)
DNA (1770bp) protein (590aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JNN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64517.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L3_082_000M1_scaffold_1658_29
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24238..25848)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=L1Q834_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32647.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L3_082_000M1_scaffold_1658_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25841..26257)
DNA (417bp) protein (139aa)
Transposase n=3 Tax=Lachnospiraceae RepID=E5VK10_9FIRM
Transposase {ECO:0000313|EMBL:EFV16854.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
transposase IS200-family protein
Displaying items 1-30 of 44 in total

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